Table 1:
Strain | ST | CC | PorA (VR2) | fHbp | NadA | NHBA | ||||||
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Novartis variant* | Expression† | GenBank accession no.‡ | Variant | Expression† | GenBank accession no.‡ | Peptide | Expression† | GenBank accession no.‡ | ||||
44/76-SL | 32 | 32 | 16 | 1.1§ | ++ | AY548370 | x | x | x | 3 | + | AF226436 |
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5/99 | 1349 | 8 | 2 | 2.2 | − | GQ302858 | 2§ | ++ | GQ302859 | 20 | +/− | GQ302856 |
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NZ98/254 | 42 | 41/44 | 4§ | 1.1 | + | AY548375 | x | x | 2 | + | GQ302855 | |
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M10713 | 136 | 41/44 | 16-3 | 2.2 | + | NA | x | x | x | 10§ | + | NA |
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M00-242922 | 41 | 41/44 | 4§ | 1.4 | + | FJ750977 | x | x | x | 2 | + | FJ750982 |
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M01-240101 | 1049 | 269 | 15 | 1.2 | + | FJ750976 | x | x | x | 21 | +/− | FJ750981 |
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M01-240355 | 213 | 213 | 14 | 3.3 | +/− | EU541888 | 5 | +/− | FJ750979 | 18 | +/− | GQ302857 |
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M01-240364 | 11 | 11 | 2 | 3.3 | +/− | FJ750978 | 2§ | + | FJ619643 | 28 | +/− | FJ750980 |
Note: CC = clonal complex, fHbp = factor H binding protein, NadA = Neisseria adhesin A, NA = GenBank accession number not assigned, NHBA = Neisseria heparin binding antigen, PorA = porin A, ST = sequence type, VR2 = variable region 2, x = does not harbour the NadA gene.
The fHbp variant nomenclature displayed is the one used by Novartis obtained by adding a prefix defining the main variant (1, 2 or 3) to the subvariant.10
Expression of antigen as determined by binding of murine antibodies raised against each of the vaccine antigen(s): − low expression, +/− medium expression, + high expression, ++ very high expression.
GenBank accession number identifying unique sequence at www.ncbi.nlm.nih.gov.
These vaccine targets are homologous (PorA, fHbp, NHBA) or cross-reactive (NadA) to those contained in 4CMenB.