Table 1. Total number of high-quality sequences, coverage for taxonomic groups and Phylogenetic Diversity (PD).
| Land use | Total number of sequences | Sequence coverage (%) | PD* | |||||
| Phylum | Class | Order | Family | Genus | 3% cutoff | |||
| AP1 | 8405 | 100 | 100 | 100 | 99.9 | 99.6 | 77.9 | 65.30 |
| AP2 | 9227 | 100 | 100 | 99.9 | 99.8 | 99.6 | 80.3 | 60.24 |
| AP3 | 7821 | 100 | 99.9 | 99.9 | 99.8 | 99.7 | 83.3 | 50.90 |
| AP4 | 7133 | 100 | 99.9 | 99.9 | 99.8 | 99.6 | 77.3 | 62.16 |
| NF1 | 9983 | 100 | 100 | 99.9 | 99.9 | 99.5 | 82.4 | 62.47 |
| NF2 | 7420 | 100 | 99.9 | 99.9 | 99.8 | 99.5 | 78.4 | 65.19 |
| NF3 | 12094 | 100 | 100 | 100 | 99.9 | 99.6 | 81.4 | 71.51 |
| NF4 | 11318 | 100 | 100 | 100 | 99.9 | 99.7 | 82.4 | 67.32 |
| NP1 | 6770 | 100 | 99.9 | 99.9 | 99.7 | 99.5 | 79.7 | 60.80 |
| NP2 | 3949 | 100 | 99.9 | 99.8 | 99.5 | 98.7 | 70.9 | 64.96 |
| NP3 | 2554 | 99.9 | 99.8 | 99.7 | 99.0 | 98.3 | 99.9 | 63.90 |
| NP4 | 2288 | 99.9 | 99.7 | 99.6 | 99.3 | 98.2 | 99.9 | 63.81 |
| SF1 | 10472 | 100 | 100 | 100 | 99.9 | 99.6 | 79.8 | 70.28 |
| SF2 | 14358 | 100 | 100 | 99.2 | 99.9 | 99.6 | 81.7 | 71.04 |
| SF3 | 10248 | 100 | 100 | 100 | 99.9 | 99.6 | 78.8 | 69.31 |
| SF4 | 16367 | 100 | 100 | 100 | 99.9 | 99.8 | 87.1 | 61.79 |
*
The means did not differ statistically between the samples by the Tukey test at 5% probability error. The PD was calculated at the family level. AP = Acacia plantation; NF = Natural forest; NP = Natural pasture; SF = Soybean field.