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. 2013 Oct 17;8(10):e77033. doi: 10.1371/journal.pone.0077033

Table 2. Summary of the 40 PhyEco marker candidates identified for the group “Bacteria plus Archaea.”.

Marker ID Gene Family Descriptions Correspondent AMPHORA Marker
BA00001 ribosomal protein S2 rpsB
BA00002 ribosomal protein S10 rpsJ
BA00003 ribosomal protein L1 rplA
BA00004 translation elongation factor EF-2 -
BA00005 translation initiation factor IF-2 -
BA00006 metalloendopeptidase -
BA00007 ribosomal protein L22 -
BA00008 ffh signal recognition particle protein -
BA00009 ribosomal protein L4/L1e rplD
BA00010 ribosomal protein L2 rplB
BA00011 ribosomal protein S9 rpsI
BA00012 ribosomal protein L3 rplC
BA00013 phenylalanyl-tRNA synthetase beta subunit -
BA00014 ribosomal protein L14b/L23e rplN
BA00015 ribosomal protein S5 -
BA00016 ribosomal protein S19 rpsS
BA00017 ribosomal protein S7 -
BA00018 ribosomal protein L16/L10E rplP
BA00019 ribosomal protein S13 rpsM
BA00020 phenylalanyl-tRNA synthetase α subunit -
BA00021 ribosomal protein L15 -
BA00022 ribosomal protein L25/L23 -
BA00023 ribosomal protein L6 rplF
BA00024 ribosomal protein L11 rplK
BA00025 ribosomal protein L5 rplE
BA00026 ribosomal protein S12/S23 -
BA00027 ribosomal protein L29 -
BA00028 ribosomal protein S3 rpsC
BA00029 ribosomal protein S11 rpsK
BA00030 ribosomal protein L10 -
BA00031 ribosomal protein S8 -
BA00032 tRNA pseudouridine synthase B -
BA00033 ribosomal protein L18P/L5E -
BA00034 ribosomal protein S15P/S13e -
BA00035 Porphobilinogen deaminase -
BA00036 ribosomal protein S17 -
BA00037 ribosomal protein L13 rplM
BA00038 phosphoribosylformylglycinamidine cyclo-ligase rpsE
BA00039 ribonuclease HII -
BA00040 ribosomal protein L24 -