Table 2.
Association between miRNA SNPs and breast cancer in CBCS cases (invasive and CIS) and controls
African Americans |
Caucasians |
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---|---|---|---|---|---|---|---|---|---|
Locus/SNP | Genotype | Cases (N) | Controls (N) | OR (95% CI)a | P-valuea,b | Cases (N) | Controls (N) | OR (95% CI)a | P-valuea,b |
mir-9-1 | |||||||||
rsl2239077 | AA | 707 | 631 | Referent | 1204 | 1087 | Referent | ||
AG+GG | 35 | 27 | 1.14 (0.67 – 1.95) | 0.63 | 0 | 2 | na | na | |
mir-9-2 | |||||||||
rs 1501672 | TT | 481 | 415 | Referent | 914 | 841 | Referent | ||
CT+CC | 261 | 243 | 0.91 (0.72 – 1.14) | 0.39 | 290 | 248 | 1.05 (0.86 – 1.30) | 0.61 | |
mir-16-1/15a | |||||||||
rs9535416 | GG | 445 | 397 | Referent | 281 | 259 | Referent | ||
AG+AA | 297 | 261 | 1.03 (0.83 – 1.29) | 0.78 | 923 | 830 | 1.02 (0.83 – 1.26) | 0.82 | |
mir-34b/34c | |||||||||
rs4938723 | TT | 362 | 343 | Referent | 496 | 430 | Referent | ||
TC | 317 | 257 | 1.16 (0.92 – 1.46) | 0.21 | 563 | 503 | 0.93 (0.77 – 1.12) | 0.46 | |
CC | 63 | 58 | 1.08 (0.73 – 1.61) | 0.69 | 144 | 155 | 0.80 (0.60 – 1.05) | 0.10 | |
mir-185 | |||||||||
rs2008591 | CC | 204 | 170 | Referent | 424 | 390 | Referent | ||
CT | 383 | 306 | 1.11 (0.86 – 1.45) | 0.42 | 586 | 527 | 1.01 (0.84 – 1.23) | 0.90 | |
TT | 155 | 182 | 0.72 (0.53 – 0.98) | 0.04 | 193 | 172 | 1.05 (0.81 – 1.37) | 0.71 | |
rs887205 | AA | 173 | 132 | Referent | 397 | 365 | Referent | ||
AG | 360 | 304 | 0.92 (0.69 – 1.21) | 0.54 | 595 | 533 | 1.02 (0.84 – 1.24) | 0.85 | |
GG | 208 | 222 | 0.71 (0.52 – 0.96) | 0.03 | 210 | 191 | 1.02 (0.79 – 1.32) | 0.87 | |
rs2078749 | AA | 447 | 412 | Referent | 299 | 270 | Referent | ||
AG+GG | 294 | 246 | 1.08 (0.86 – 1.35) | 0.50 | 904 | 819 | 1.00 (0.82 – 1.23) | 0.97 | |
mir-206 | |||||||||
rs6920648 | AA | 342 | 282 | Referent | 370 | 325 | Referent | ||
AG | 308 | 296 | 0.84 (0.66 – 1.05) | 0.13 | 564 | 554 | 0.85 (0.70 – 1.04) | 0.11 | |
GG | 91 | 80 | 0.97 (0.69 – 1.38) | 0.88 | 269 | 209 | 1.15 (0.90 – 1.47) | 0.28 | |
rsl6882131 | CC | 365 | 342 | Referent | 671 | 592 | Referent | ||
CT | 308 | 254 | 1.15 (0.92 – 1.45) | 0.22 | 458 | 419 | 0.94 (0.79 – 1.13) | 0.53 | |
TT | 69 | 62 | 1.00 (0.67 – 1.47) | 0.98 | 75 | 78 | 0.82 (0.58 – 1.18) | 0.29 |
P-values and ORs adjusted for age, ancestry and offset term is for general or dominant model (in the case of small sample size for rare homozygote). The offset term is included in the model using the OFFSET option in SAS Proc Logistic.
P-value is unadjusted for multiple comparisons