Skip to main content
. 2013 Oct 21;8(10):e76954. doi: 10.1371/journal.pone.0076954

Table 1. Summary Information on Eighteen Sequenced Small RNA Libraries from a Developmental Series of Williams (PI548631) Seed and Seed Coats Including Developmental Stage and Number of Reads.

Tissue Developmental stage Replicate Instrument model # of Reads
Whole Seed 4 days after flowering BR1 Illumina HiSeq 2000 27.0 M
Whole Seed 4 days after flowering BR2 Illumina HiSeq 2000 12.1 M
Whole Seed 12–14 days after flowering BR1 Illumina HiSeq 2000 35.2 M
Whole Seed 12–14 days after flowering BR2 Illumina HiSeq 2000 13.1 M
Whole Seed 22–24 days after flowering BR1 Illumina HiSeq 2000 30.8 M
Whole Seed 22–24 days after flowering BR2 Illumina HiSeq 2000 10.3 M
Seed Coat 5–6 mg fresh weight BR1 Illumina HiSeq 2000 17.8 M
Seed Coat 5–6 mg fresh weight BR2 Illumina HiSeq 2000 25.3 M
Seed Coat 10–25 mg fresh weight NA Illumina HiSeq 2000 12.0 M
Seed Coat 25–50 mg fresh weight NA Illumina HiSeq 2000 12.0 M
Seed Coat 50–75 mg fresh weight BR1 Illumina Genetic Analyzer *2.9 M
Seed Coat 50–75 mg fresh weight BR2 Illumina HiSeq 2000 11.5 M
Seed Coat 75–100 mg fresh weight BR1 Illumina Genome Analyzer II 30.1 M
Seed Coat 75–100 mg fresh weight BR2 Illumina HiSeq 2000 10.5 M
Seed Coat 200–300 mg fresh weight BR1 Illumina HiSeq 2000 31.3 M
Seed Coat 200–300 mg fresh weight BR2 Illumina HiSeq 2000 14.8 M
Seed Coat 300–400 mg fresh weight BR1 Illumina Genome Analyzer II 34.0 M
Seed Coat 300–400 mg fresh weight BR2 Illumina HiSeq 2000 17.1 M

The PI number is an accession number by which information on the cultivar is searchable in the USDA GRIN (Germplasm Resources Information Network). Williams is homozygous dominant ii genotype with yellow seed coats.

*

This library was previously reported in [4]. BR1 and BR2 are biological repeats; NA, not applicable.