Table 1. X-ray Diffraction Data and Refinement Statistics.
X-ray diffraction data | |
---|---|
beamline | Diamond I04 |
wavelength (Å) | 0.9795 |
space group | P3212 |
cell parameters a,b,c (Å) | 161.6, 161.6, 139.1 |
molecules per asymmetric unit | 2 |
resolution (Å) | 29.2–2.60 |
high resolution shell (Å) | 2.74–2.60 |
Rmergea (%) | 6.0 (66.8) |
total observations | 298633 |
unique reflections | 63561 |
I/σ(I)a | 16.1 (1.7) |
completenessa (%) | 99.6 (99.6) |
multiplicitya | 4.7 (4.7) |
refinement | |
---|---|
resolution range (Å) | 29.16–2.60 |
unique reflections | 60392 |
Rcryst (%) | 21.3 |
Rfree (%) | 24.0 |
No. of non-hydrogen atoms | 8845 |
protein | 8737 |
solvent | 108 |
rmsd bonds (Å) | 0.006 |
rmds angles (deg) | 1.0 |
B-factors | |
wilson (Å2) | 70.6 |
average (Å2) | 69.2 |
protein (Å2) | 69.1 |
solvent (Å2) | 74.1 |
rmsd B-factors | 1.3 |
ramachandran plotb | |
favored (%) | 96.9 |
allowed (%) | 3.1 |
disallowed (number) | 0 |
score, percentilec | 1.65, 99th |
Numbers in parentheses refer to the high resolution shell.
Ramachandran analysis of backbone dihedral angles was done using Molprobity (molprobity.biochem.duke.edu).
The Molprobity score provides, on a scale of X-ray resolution, an overall assessment of the quality of the protein geometry relative to a set of reference structures; the 100th percentile is among the best, the 0th percentile among the worst structures at comparable resolution (N = 6237; 2.6 Å ± 0.25 Å).