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. 2013 Oct 22;8(10):e76995. doi: 10.1371/journal.pone.0076995

Table 2. Output of the simplified cumulative link mixed model.

Coef S.E. Wald Z P
Threshold coefficients Present to common −2.59 0.09 −27.91
Common to very dense −0.02 0.08 −0.25
Fixed effects Lantana (Common) −0.09 0.25 −0.36 0.72
Lantana (Very Dense) 2.32 0.35 6.52 <0.001
Lag −2.74 0.18 −14.84 <0.001
Rainfall 0.38 0.12 3.19 0002
Fire frequency 0.48 0.19 2.49 0.01
Basal area (trees) 0.03 0.02 2.05 0.04
Helicteres isora −0.06 0.02 −3.44 0.001
TWI 0.60 0.02 34.10 <0.001
Rainfall × TWI 0.65 0.28 −2.32 0.02
Rainfall × Fire frequency −0.11 0.02 −6.13 <0.001
Random effect Variance Std. Dev.
Spatial cluster 5.65 2.38

All predictors, corresponding to the time step immediately before that of the current time step, were scaled by subtracting the mean and dividing by the standard deviation in order to make them comparable. The overall predictability of the model was high, with a gamma score of 0.78. TWI – topographic wetness index of a cell, ‘×’ – interactions between factors.