Table 3.
Sequence analysis of the CTF genes
| Unigene ID | Protein length | Homologous locus* | Locus description/function | BLASTX E-value | Query coverage† | Domains‡ |
|---|---|---|---|---|---|---|
| CTF0173 | 244 | At5g60910·1 | FRUITFULL, AGAMOUS-LIKE 8 | 1·00E-63 | 98 % | MADS and K-box |
| CTF0516 | 249 | At5g15800·1 | SEPALLATA1, AGAMOUS-LIKE 2 | 2·00E-77 | 100 % | MADS and K-box |
| CTF0607 | 212 | At5g62165·3 | FOREVER YOUNG FLOWER, AGAMOUS-LIKE 42 | 1·00E-54 | 97 % | MADS and K-box |
| CTF0316 | 188 | At5g10140·2 | FLOWERING LOCUS C, AGAMOUS-LIKE 25 | 1·00E-33 | 100 % | MADS and K-box |
| CTF0931 | 152 | At2g22540·2 | SHORT VEGETATIVE PHASE, AGAMOUS-LIKE 22 | 2·00E-23 | 75 % | K-box |
| CTF0588 | 642 | At5g02030·1 | BEL1-LIKE HOMEODOMAIN 9 | 1·00E-107 | 80 % | POX and homeodomain |
| CTF0397 | 185 | At3g49760·1 | BASIC LEUCINE-ZIPPER 5 | 2·00E-16 | 87 % | bZIP1 |
| CTF0899 | 324 | At1g68320·1 | MYB DOMAIN PROTEIN 62 | 4·00E-62 | 44 % | SANT1 and SANT2 |
The deduced protein sequences of citrus cDNAs were searched against the Arabidopsis Information Resource (TAIR) database.
*The results refer to the best hit when using the BLASTX algorithm to query the non-redundant protein sequence data set of TAIR at www.arabidopsis.org.
†Extension of the successful alignment between citrus and Arabidopsis proteins using the NCBI BLAST 2 sequences software (http://www.ncbi.nlm.nih.gov/blast/bl2seq/bl2.html).
‡The conserved domains in each citrus deduced protein were predicted with the Conserved Domain Database (CDD) from the NCBI (http://www.ncbi.nlm.nih.gov/cdd).