Table 6.
Comparison (RMSD) of J-coupling values (Hz) from AMOEBA simulations and experiments for BPTI, GB3, ubiquitin and lysozyme.
BPTI | GB3 | Ubiquitin | Lysozyme | |
---|---|---|---|---|
AMOEBA | 1.741 | 1.44 | 1.41 | 2.23 |
AMBER FF99SB138 | 1.779 | 1.48 | 1.89 | 2.60 |
AMBER FF99SB-ILDN138 | 1.448 | 0.89 | 1.43 | 2.12 |
Results from the Amber ff99SB force field, and the refined Amber ff99SB-ILDN force field are included for comparison.