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. Author manuscript; available in PMC: 2013 Oct 25.
Published in final edited form as: Curr Pharm Des. 2012;18(9):1255–1265. doi: 10.2174/138161212799436412

Table 1.

Summary of hot spot prediction methods.

Hotspot prediction Properties Used Availability Technique Reference
FoldX Energy-based Tool & Server Computational alanine scanning [70]
Robetta Energy-based Server Computational alanine scanning [71]
PP_Site Energy, structure-based Tool Simple algorithm [72]
FTMAP Energy –based Tool & Server Probe based rigid body docking with fast Fourier transform correlation [73]
PCRPi, PCRPi-W Energy, structure, evolutionary Tool & Server Bayesian Network [74,75]
Guhary & Chakrabarti H-bonding, interface location Tool Simple algorithm [76]
KFC2 ASA, various structural features Server Support Vector Machine (SVM) [77]
MINERVA Structure, sequence, molecular interaction Tool Descision Tree, SVM [78]
HSPred Energy-based Tool SVM (Residue specific) [79, 80]
Rajamani Side chain ΔASA Tool Molecular Dynamics [59]
Higa & Tozzi Structural, evolutionary Tool SVM [81]
Grosdidier & Recio Energy-based (Docking) Tool Normalized interface propensity [82]
HotPoint HotSprint Conservation, accessibility, residue propensity Server & Database Empirical formula [83, 84]