FoldX |
Energy-based |
Tool & Server |
Computational alanine scanning |
[70] |
Robetta |
Energy-based |
Server |
Computational alanine scanning |
[71] |
PP_Site |
Energy, structure-based |
Tool |
Simple algorithm |
[72] |
FTMAP |
Energy –based |
Tool & Server |
Probe based rigid body docking with fast Fourier transform correlation |
[73] |
PCRPi, PCRPi-W |
Energy, structure, evolutionary |
Tool & Server |
Bayesian Network |
[74,75] |
Guhary & Chakrabarti |
H-bonding, interface location |
Tool |
Simple algorithm |
[76] |
KFC2 |
ASA, various structural features |
Server |
Support Vector Machine (SVM) |
[77] |
MINERVA |
Structure, sequence, molecular interaction |
Tool |
Descision Tree, SVM |
[78] |
HSPred |
Energy-based |
Tool |
SVM (Residue specific) |
[79, 80] |
Rajamani |
Side chain ΔASA |
Tool |
Molecular Dynamics |
[59] |
Higa & Tozzi |
Structural, evolutionary |
Tool |
SVM |
[81] |
Grosdidier & Recio |
Energy-based (Docking) |
Tool |
Normalized interface propensity |
[82] |
HotPoint HotSprint |
Conservation, accessibility, residue propensity |
Server & Database |
Empirical formula |
[83, 84] |