Table 4.

Known miRNA families and their transcript abundance identified from CK and Cd200 libraries in radish

Family	No. of members	miRNA reads		Total miRNA reads	Ratio (Cd200/CK)
		CK	Cd200
Conserved miRNA
miR156	13	291 882	175 380	467 262	0.60
miR158	9	114 972	2904	178 876	0.03
miR159	4	2081	1233	3314	0.59
miR160	2	45	122	167	2.71
miR162	2	1861	742	2603	0.40
miR164	8	54 932	36 291	91 223	0.66
miR165	4	6986	1707	8693	0.24
miR166	11	189 669	57 169	246 838	0.30
miR167	7	2628	12 794	15 422	4.87
miR168	3	72 829	61 084	133 913	0.84
miR169	4	783	604	1387	0.77
miR172	3	2103	1933	4036	0.92
miR319	1	7241	1572	8813	0.22
miR390	3	11 993	3748	15 741	0.31
miR391	2	2157	1228	3385	0.57
miR393	2	30	224	254	7.47
miR395	4	210	477	687	2.27
miR396	2	950	21 753	5773	22.90
miR397	1	3252	3013	6265	0.93
miR398	1	164	753	917	4.59
miR399	2	23	55	78	2.39
miR408	5	417 843	201 889	619 732	0.48
Non-conserved miRNA
miR403	3	1168	659	1 827	0.56
miR824	2	1178	568	1746	0.48
miR825	2	115	42	157	0.37
miR827	2	36	472	508	13.11
miR854	1	485	145	630	0.30
miR857	1	1598	3162	5760	1.98
miR1023	1	5	8	13	1.6
miR1442	1	183	26	209	0.14
miR2111	1	6	32	38	5.33
miR5021	1	15	76	91	5.07