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. 2013 Oct 23;8(10):e78480. doi: 10.1371/journal.pone.0078480

Table 3. Cell type markers.

Neuronal markers
Gene Description Chrom. FPKM GM FPKM WM Fold Change q-value Significant Ensembl ID
NEFL neurofilament, light polypeptide chr8 204.57 2.89839 70.58056369 1.00E-06 yes ENSG00000104725
GABRA1 gamma-aminobutyric acid (GABA) A receptor, alpha 1  chr5 18.8275 0.358014 52.58872558 0.00155552 yes ENSG00000022355
SYT1 synaptotagmin I  chr12 87.9017 1.49415 58.83057257 0.000873923 yes ENSG00000067715
SLC12A5 solute carrier family 12 (potassium/chloride transporter), member 5  chr20 31.4802 0.808493 38.93688628 1.17E-08 yes ENSG00000124140
SV2B synaptic vesicle glycoprotein 2B chr15 16.0663 1.40407 11.44266312 0.000361367 yes ENSG00000185518
SNAP25 synaptosomal-associated protein, 25kDa chr20 974.198 34.271 28.42630796 0.173004 no ENSG00000132639
KCNQ2 potassium voltage-gated channel, KQT-like subfamily, member 2  chr20 1.31699 0 Unique to GM 0.780598 no ENSG00000075043
Oligodendrocyte markers
Gene Description Chrom. FPKM GM FPKM WM Fold Change q-value Significant Ensembl ID
SOX10 SRY (sex determining region Y)-box 10 chr22 20.4556 133.049 6.504282446 0.0450965 yes ENSG00000100146
GJC2 gap junction protein, gamma 2, 47kDa  chr1 7.88551 57.9386 7.347476574 4.56E-07 yes ENSG00000198835
MOG myelin oligodendrocyte glycoprotein  chr6 8.33271 49.0835 5.890460606 0.000313549 yes ENSG00000204655
MAG myelin associated glycoprotein chr19 62.8597 530.705 8.442690627 1.60E-05 yes ENSG00000105695
MAL mal, T-cell differentiation protein chr2 68.0608 546.616 8.03128967 0.0139824 yes ENSG00000172005
GAL3ST1 galactose-3-O-sulfotransferase 1  chr22 6.15286 41.0321 6.668784923 0.000107928 yes ENSG00000128242
UGT8 UDP glycosyltransferase 8 chr4 23.6732 88.8345 3.752534512 0.00966086 yes ENSG00000174607
CSPG4 chondroitin sulfate proteoglycan 4 chr15 2.95805 4.12994 1.396169774 0.732599 no ENSG00000173546
PDGFRA platelet-derived growth factor receptor, alpha polypeptide chr4 4.67575 4.8763 1.042891515 0.992145 no ENSG00000134853
MOBP myelin-associated oligodendrocyte basic protein chr3 160.105 851.149 5.316192499 0.374118 no ENSG00000168314