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. Author manuscript; available in PMC: 2013 Oct 28.
Published in final edited form as: Curr Top Med Chem. 2012;12(7):766–796. doi: 10.2174/156802612799984571

Table 7.

MbtA Inhibitors: Nucleobase Domain SAR

graphic file with name nihms520750u4.jpg
Compound, R = KIapp (μM) MIC99(μM) (iron-deficient) MIC99 (μM) (iron-rich)
graphic file with name nihms520750t27.jpg 51, X = Y = N 0.0066 ± 0.0015 0.39 1.56
80, X = N; Y = CH 0.0243 ± 0.0070 6.25 50
81, X = Y= CH 0.0201 ± 0.0023 6.25 50

graphic file with name nihms520750t28.jpg 82, =O 0.80 ± 0.05 >100 >100
83, –NMe2 0.38 ± 0.03 50 n.d.
84, –NHMe 0.0016 ± 0.0002 0.39 1.56
85, –NHEt 0.0044 ± 0.0008 0.39 1.56
86, –NHn-Pr 0.0035 ± 0.0002 0.39 1.56
87, –NHi-Pr 0.0070 ± 0.0009 25 >100
88, –NHi-Bu 1.14 ± 0.23 >100 >100
89, –NHcyclopropy 0.0019 ± 0.0001 0.098 6.25
90, –NHcyclobutyl 0.124 ± 0.012 >100 >100
91, –NHcyclopenty 9.4 ± 5.2 >100 >100
92, –NHBn 8.3 ± 0.8 >100 >100

graphic file with name nihms520750t29.jpg 93, –Br 2.05 ± 0.30 >50 >50
94, –N3 42.5 ± 6.2 >50 >50
95, –NH2 183 ± 19 >50 >50

graphic file with name nihms520750t30.jpg 96, –I 0.0030 ± 0.0003 0.19 3.12
97, –NHPh 0.0009 ± 0.0002 0.049 0.39
98, –CCPh 0.0004 ± 0.0001 0.049 0.39
99, –Ph 0.0003 ± 0.0001 0.049 0.39
100, biphen-2-yl 0.047 ± 0.002 >50 >50
101, biphen-3-yl 0.0014 ± 0.0002 3.13–6.25 12.5–25
102, biphen-4-y 0.0010 ± 0.00002 3.13–6.25 12.5–25
103 graphic file with name nihms520750t31.jpg 0.0033 ± 0.0003 3.13 >50
104 graphic file with name nihms520750t32.jpg 0.0027 ± 0.0004 >25 >50