Figure 2.

Typical Haplotypes of An-1/an-1 in O. sativa and O. rufipogon.

(A) The an-1(Tn+) subhaplotype in Nipponbare, GLA4, and most japonica varieties.

(B) The an-1(G-) subhaplotype in HP228 and most indica varieties.

(C) The An-1 haplotype in W1943 and most accessions of wild rice.

The common variations between cultivated rice and wild rice are indicated in this figure. Black bars represent 5′ upstream regions and introns. Light-gray bars represent 5′ and 3′ untranslated regions. Dark-gray bars represent coding regions. The triangles represent insertions. The short dashes represent single base pair deletions. The star in (B) represents the premature stop codon site in an-1(G-). Bar = 1 kb.