Table 1. Frequency of different type of motif in Di-, Tri-, Tetra-, Penta-, Hexa-, and other-nucleotide (> hexanucleotide) SSRs from Clementine mandarin.

Motif length	location	Repeat number									Total	Total (%)
		3	4	5	6	7	8	9	10	>10
Di	Genome	-	-	-	7,806	4,966	3,763	2,823	2,257	7,426	29,041	36.0
	Transcript	-	-	-	747	382	312	282	178	514	2,417	26.9
	CDS	-	-	-	99	18	11	26	6	27	187	5.8
	UTR	-	-	-	648	364	301	256	172	487	2,228	38.5
Tri	Genome	-	-	8,248	4,027	2,068	1,187	647	402	1,194	17,773	22.0
	Transcript	-	-	1,585	819	395	213	107	45	66	3,230	35.9
	CDS	-	-	1,049	529	245	125	59	28	25	2,060	64.2
	UTR	-	-	536	290	150	88	48	17	41	1,170	20.0
Tetra	Genome	-	5,974	1,834	437	175	76	68	44	51	8,659	10.7
	Transcript	-	449	150	59	14	5	3	2	0	682	7.6
	CDS	-	21	9	2	0	0	0	0	0	32	1.0
	UTR	-	428	141	57	14	5	3	2	0	650	11.2
Penta	Genome	12,760	2,346	382	76	17	10	2	0	2	15,595	19.3
	Transcript	825	163	45	10	4	0	0	0	0	1,047	11.6
	CDS	102	6	1	1	1	0	0	0	0	111	3.5
	UTR	723	157	44	9	3	0	0	0	0	936	16.1
Hexa	Genome	5,869	872	153	28	13	1	1	1	1	6,939	8.6
	Transcript	1,095	211	44	9	0	0	1	1	0	1,361	15.1
	CDS	623	128	25	8	0	0	1	1	0	786	24.5
	UTR	472	83	19	1	0	0	0	0	0	575	10.0
Others	Genome	2,243	296	76	23	22	10	6	2	23	2,701	3.3
	Transcript	214	22	8	3	2	3	0	0	0	252	2.8
	CDS	21	9	1	0	0	0	0	0	0	31	1.0
	UTR	193	13	7	3	2	3	0	0	0	221	3.8