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. Author manuscript; available in PMC: 2014 Sep 1.
Published in final edited form as: J Clin Virol. 2013 Jul 21;58(1):10.1016/j.jcv.2013.06.033. doi: 10.1016/j.jcv.2013.06.033

Table 1.

Comparison of efficacy and reproducibility of influenza A and B extraction on three automated systems.

TruTip/epMotiona easyMAGa QIAcubeb

Input (gc) Average Ct ±
StDev
% CV Input (gc) Average Ct
± StDev
% CV Input (gc) Average Ct ±
StDev
% CV

Influenza A 7.45 × 106 24.77 ± 0.08 0.33 7.45 × 106 24.01 ± 0.08 0.33 3.73 × 106 24.09 ± 0.26 1.08
7.45 × 105 28.30 ± 0.49 0.49 7.45 × 105 27.22 ± 0.12 0.44 3.73 × 105 27.41 ± 0.30 1.09
7.45 × 104 31.92 ± 0.38 0.38 7.45 × 104 30.72 ± 0.19 0.62 3.73 × 104 30.66 ± 0.22 0.72
7.45 × 103 35.12 ± 0.34 0.97 7.45 × 103 34.74 ± 0.44 1.27 3.73 × 103 34.04 ± 0.23 0.68
7.45 × 102 38.32 ± 1.15c 3.00 7.45 × 102 36.58 ± 1.07 2.93 3.73 × 102 37.68 ± 0.35 0.93
7.45 × 101 1/8 detected NC 7.45 × 101 0/8 detected NC 3.73 × 101 3/8 detected NC

Influenza B 3.70 × 106 25.01 ± 0.16 0.64 3.70 × 106 23.44 ± 0.06 0.26 1.85 × 106 23.54 ± 0.39 1.66
3.70 × 105 27.82 ± 0.28 1.01 3.70 × 105 26.79 ± 0.08 0.30 1.85 × 105 26.98 ± 0.29 1.07
3.70 × 104 31.21 ± 0.15 0.49 3.70 × 104 30.14 ± 0.17 0.17 1.85 × 104 30.04 ± 0.35 1.17
3.70 × 103 34.68 ± 0.18 0.52 3.70 × 103 33.52 ± 0.10 0.30 1.85 × 103 33.25 ± 0.46 1.38
3.70 × 102 38.54± 0.78d 2.02 3.70 × 102 36.71 ± 0.59 1.61 1.85 × 102 36.31 ± 0.30 0.83
3.70 × 101 1/8 detected NC 3.70 × 101 3/8 detected NC 1.85 × 101 4/8 detected NC
a

Values are the average from 3 or 4 extractions for each dilution (input volume = 250 µL, elution volume = 100 µL) analyzed in duplicate by RT-PCR (n = 6 or 8).

b

Values are the average of 4 extractions per dilution (input volume = 125 µL, elution volume = 50 µL) analyzed in duplicate by RT-PCR (n = 8).Thus the calculated amounts used in equivalent PCR assays are equal in all three methods.

c

6 of 8 RT-PCR replicates detected

d

7 of 8 RT-PCR replicates detected

NC=Not calculated