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. 2013 Oct;79(19):5970–5977. doi: 10.1128/AEM.01891-13

Table 3.

Stability of the reference gene 16S rrn at different stress conditions at early and late logarithmic growth phases in Yersinia pseudotuberculosis IP32953

Parameters Value at:
Ea
Early logarithmic growth phase Late logarithmic growth phase Both growth phases
3°C and 28°C 1.05
    Arithmetic mean (Cq) 16.91 17.00 16.96
    Geometric mean (Cq) 16.90 17.00 16.95
    Avg deviation 0.63 0.30 0.46
    CV (% Cq)b 3.89 2.00 3.10
37°C and 28°C 0.94
    Arithmetic mean (Cq) 18.40 18.27 18.34
    Geometric mean (Cq) 18.40 18.26 18.33
    Avg deviation 0.25 0.20 0.24
    CV (% Cq)b 1.60 1.23 1.48
42°C and 28°C 0.95
    Arithmetic mean (Cq) 17.83 17.64 17.74
    Geometric mean (Cq) 17.83 17.63 17.73
    Avg deviation 0.23 0.31 0.27
    CV (% Cq)b 1.52 2.08 1.90
pH 5.0 and 28°C 1.04
    Arithmetic mean (Cq) 13.97 13.84 13.90
    Geometric mean (Cq) 13.96 13.82 13.89
    Avg deviation 0.35 0.53 0.44
    CV (% Cq)b 2.84 4.28 3.65
pH 9.0 and 28°C 0.93
    Arithmetic mean (Cq) 18.38 18.13 18.25
    Geometric mean (Cq) 18.36 18.11 18.24
    Avg deviation 0.71 0.72 0.73
    CV (% Cq)b 4.07 4.35 4.26
3% NaCl and 28°C 0.94
    Arithmetic mean (Cq) 18.98 18.48 18.73
    Geometric mean (Cq) 18.94 18.45 18.69
    Avg deviation 1.29 1.04 1.16
    CV (% Cq)b 6.85 5.78 6.49
3% ethanol and 28°C 0.95
    Arithmetic mean (Cq) 17.91 17.78 17.85
    Geometric mean (Cq) 17.90 17.77 17.84
    Avg deviation 0.46 0.56 0.51
    CV (% Cq)b 2.88 3.35 3.14
a

E, reaction efficiency.

b

CV, coefficient of variance as a percentage of the Cq value.