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. 2013 Nov;81(11):4121–4127. doi: 10.1128/IAI.00359-13

Table 2.

Primers and peptides

Primer or peptide Description Sequence
Primers
    Primer1 emm typing, forward 5′-TATTCGCTTAGAAAATTAA-3′
    Primer2 emm typing, reverse 5′-GCAAGTTCTTCAGCTTGTTT-3′
    SilB-f1 Detection of sil 5′-GGAGTTGGTTTATCAAATGTCAG-3′
    SilD-r1 Detection of sil 5′-ATCTGCCACAAAGACTGATCAAG-3′
    PrtS 5′ f Detection of protease 5′-CGCAACATCTCACCAATAC-3′
    PrtS 5′ r Detection of protease 5′-CCCAGTCCTCATCAAAATC-3′
    prtS 3′ f Detection of protease 5′-GCATAACAGCCCGAGGAAGCAA-3′
    prtS 3′ r Detection of protease 5′-CATCTGCATCCCGCACAAGGTA-3′
    Allel-A silCR start codon 5′-AATTTTATTAGGAGATATTACAATA-3′
    Allel-G silCR start codon 5′-AATTTTATTAGGAGATATTACAATG-3′
SilCR peptide Synthetic DIFKLVIDHISMKARKK