Table 1.
Colocalization of SORLA and APP with marker proteins in SY5Y-A/S cellsa
Colocalization | Mean tM value ± SEM |
P value | |
---|---|---|---|
With PACS1 | Without PACS1 | ||
SORLA and Vti1b | |||
tM1 (Vti1b-SORLA overlap) | 0.254 ± 0.017 | 0.186 ± 0.015 | <0.01 |
tM2 (SORLA-Vti1b overlap) | 0.586 ± 0.023 | 0.430 ± 0.014 | <0.001 |
SORLA and EEA1 | |||
tM1 (EEA1-SORLA overlap) | 0.072 ± 0.004 | 0.117 ± 0.009 | <0.01 |
tM2 (SORLA-EEA1 overlap) | 0.152 ± 0.017 | 0.220 ± 0.017 | <0.001 |
APP and SORLA | |||
tM1 (SORLA-APP overlap) | 0.504 ± 0.038 | 0.457 ± 0.039 | >0.05 |
tM2 (APP-SORLA overlap) | 0.233 ± 0.018 | 0.251 ± 0.002 | >0.05 |
APP and Vti1b | |||
tM1 (Vti1b-APP overlap) | 0.134 ± 0.01 | 0.118 ± 0.007 | >0.05 |
tM2 (APP-Vti1b overlap) | 0.84 ± 0.016 | 0.611 ± 0.028 | <0.001 |
APP and EEA1 | |||
tM1 (EEA1-APP overlap) | 0.059 ± 0.004 | 0.081 ± 0.004 | <0.001 |
tM2 (APP-EEA1 overlap) | 0.448 ± 0.026 | 0.559 ± 0.027 | <0.01 |
Colocalization of SORLA and APP with the indicated proteins in SY5Y-A/S cells treated with a siRNA directed against endogenous PACS1 (without PACS1) or with a scrambled control siRNA (with PACS1) was tested by confocal immunofluorescence microscopy. The extent of colocalization was scored by determination of thresholded Manders (tM) values as detailed in Materials and Methods.