Table 3. Significantly regulated pathways in zebrafish after TCDD treatment, by GSEA analysis with cutoff FDR<0.25.
Pathways | NES | NOM p-value | FDR q-value |
G1 to S cell cycle reactome | 1.94 | <0.001 | 0.024 |
HSA04110 cell cycle | 1.9 | <0.001 | 0.025 |
Cell cycle KEGG | 1.86 | 0.003 | 0.031 |
Proteasome pathway | 1.81 | 0.007 | 0.053 |
HSA03050 Proteasome | 1.74 | 0.007 | 0.115 |
HSA03010 Ribosome | −2.31 | <0.001 | <0.001 |
Ribosomal proteins | −2.21 | <0.001 | 0.001 |
HSA04020 Calcium signaling pathway | −1.85 | 0.005 | 0.126 |
Prostaglandin synthesis regulation | −1.81 | 0.005 | 0.167 |
ST FAS signaling pathway | −1.81 | 0.007 | 0.139 |
ST T cell signal transduction | −1.79 | <0.001 | 0.135 |
HSA04650 Natural killer cell mediated cytotoxicity | −1.76 | 0.007 | 0.160 |
HSA04660 T cell receptor signaling pathway | −1.75 | 0.008 | 0.152 |
Note: NES, normalized enrichment scores; NOM p-value, nominal p-value for enrichment; FDR, false discovery rate.