Table 2. Transcript structure of the early responding genes from the constitutive exon analysis.
| Genea | Intron/s (bp) | mRNA (bp) | CDs (bp) | CDs interrupted by intron? |
|---|---|---|---|---|
| Acp54A1 | — | 293 | 140 | — |
| CG32198 | — | 470 | 411 | — |
| CG15357 | — | 485/560 | 347 | — |
| CG14966 | — | 587 | 422 | — |
| Robl37BC | — | 617 | 348 | — |
| obst-I | — | 661 | 659 | — |
| CG30487 | — | 728 | 597 | — |
| CG18125 | — | 744 | 719 | — |
| CG6974 | — | 756 | 755 | — |
| Acp29AB | — | 767 | 704 | — |
| GstE7 | — | 769 | 672 | — |
| GstE1 | — | 831 | 675 | — |
| CG4461b | — | 864 | 603 | — |
| Hsp23b | — | 849/884 | 561 | — |
| fan | — | 912 | 656 | — |
| CG32271 | — | 925 | 747 | — |
| Hsp26b | — | 958 | 627 | — |
| Hsp67Bcb | — | 987 | 600 | — |
| CG32302 | — | 1079 | 941 | — |
| Hsp27b | — | 1220 | 642 | — |
| CG2887b | — | 1234 | 1029 | — |
| CR17024 | — | 1288 | NA | NA |
| CG15904 | — | 1899 | 1899 | — |
| CR40546 | — | 1944 | NA | NA |
| CG11619 | — | 2100 | 2099 | — |
| Hsp68b | — | 2228 | 1908 | — |
| Hsp70Bc b | — | 2386 | 1926 | — |
| Hsp70Ba b | — | 2475 | 1926 | — |
| CG6000/CR44907 b | −/144 | 588/539 | 446/NA | −/NA |
| DnaJ-1b | −/245 | 2161/1916 | 1005 | −/N |
| Hsrωb | −/711;711;644 | 21,520;14,086/1176;1670;1223 | NA | NA |
| stvb | 65;78;118/65;443;25;78/2553;65;78;430 | 2491/2570;2496/3279;3357;382 | 1551/1629;1551;1551/830;1908;1833 | Y |
| CG31287b | 53;56 | 777 | 699 | Y |
| CG14227 | 67;65;67 | 933 | 861 | Y |
| CG10264 | 212;74 | 1022 | 811 | Y |
| Gr85a | 52 | 1194 | 1194 | Y |
| CG14011 | 54;59;62 | 1482/1477/1474 | 1167 | N |
| aur | 63;61 | 1573 | 1236 | Y |
| CG12267 | 68;62;56;57;57;49;68 | 1654 | 1569 | Y |
| Cyp6T3 | 60 | 1694 | 1506 | Y |
| Ugt86DE | 65 | 1735 | 1584 | Y |
| CG3281 | 52 | 1866 | 1617 | Y |
| Cyp6G2 | 50 | 1989 | 1560 | Y |
| CG15326 | 52;270 | 2004 | 2001 | Y |
| CG5608 | 67;62;66;51;60;61;66;52 | 2244 | 2064 | Y |
| CG6785 | 91;74 | 3985 | 1716 | Y |
| CG31659c | 62;48;60;60;48 | 632/695 | 579/528 | Y |
| CG15449c | 224;101 | 765 | 396 | Y |
| CG14342c | 99;74;58 | 776 | 426 | Y |
| CG13813c | 59 | 1527 | 1293 | Y |
| CG6792c | 55 | 2009 | 1410 | Y |
| ref(2)Pc | 631 | 2223/2417 | 1800 | Y |
| CG5204c | 205;56 | 2364 | 2244 | Y |
Pre-mRNA intron, mRNA and coding sequence (CDs) lengths are shown (/ indicates transcript isoforms).
a
List derived from the clustering output showing genes coregulated during thermal stress and may not include some thermally upregulated genes with different overall expression patterns.
b
Known role in response to heat including chaperones and protein folding, either from experimental data or inferred from sequence similarity.
c
Not detected as upregulated until 4-hr recovery at 25°.