Table 3. Inserted or deleted regions identified in the wPipMol genome that are absent from wPipPel (1–3), or present in the wPipPel genome but absent from wPipMol (4–7).
| Indel (WO location) | Gene | Putative protein function/domain |
| 1 | ankM1 | Ankyrin repeat motif; similar to WD0596 |
| 2 | ankM2 | Ankyrin and TPR repeat motif |
| 3 | wtrM | Transcriptional regulator |
| 4 (WO3 end) | WP0348–WP0351 | All hypothetical |
| 5 (WO4) | WP0453 | Hypothetical; transmembrane helix |
| WP0454 | Endonuclease | |
| WP0455 | Patatin family phospholipase | |
| WP0456 | Hypothetical; membrane lipoprotein attachment site | |
| WP0457 | Transcriptional regulator | |
| WP0458 | Hypothetical | |
| 6 (WO5 end) | WP1286–WP1288 | All hypothetical |
| 7 (WO5) | WP1337 | Ankyrin repeat motif (ank57); Transmembrane domain |