Table 4.
Vervet BAC discordancy rates to rhesus chromosomes (rheMac2)
Rhesus Chromosome | Length | Concordant BACs | Discordant BACs | Discordant BACs/Mb |
---|---|---|---|---|
1 | 228,252,215 | 11,051 | 333 | 1.5 |
2 | 189,746,636 | 10,793 | 271 | 1.4 |
3 | 196,418,989 | 9421 | 416 | 2.1 |
4 | 167,655,696 | 9358 | 277 | 1.7 |
5 | 182,086,969 | 10,950 | 247 | 1.4 |
6 | 178,205,221 | 9697 | 411 | 2.3 |
7 | 169,801,366 | 8560 | 340 | 2.0 |
8 | 147,794,981 | 8085 | 358 | 2.4 |
9 | 133,323,859 | 6598 | 476 | 3.6 |
10 | 94,855,758 | 3610 | 339 | 3.6 |
11 | 134,511,895 | 6886 | 153 | 1.1 |
12 | 106,505,843 | 6266 | 108 | 1.0 |
13 | 138,028,943 | 6869 | 193 | 1.4 |
14 | 133,002,572 | 6630 | 210 | 1.6 |
15 | 110,119,387 | 5563 | 214 | 1.9 |
16 | 78,773,432 | 2829 | 165 | 2.1 |
17 | 94,452,569 | 5380 | 206 | 2.2 |
18 | 73,567,989 | 4092 | 143 | 1.9 |
19 | 64,391,591 | 1124 | 199 | 3.1 |
20 | 88,221,753 | 3134 | 120 | 1.4 |
X | 153,947,521 | 3743 | 302 | 2.0 |
Assembly | 2,863,665,185 | 140,639 | 5481 | 1.9 |
This table shows the same metrics as in Table 3, except that it compares vervet to rhesus macaque rather than human. Chromosomes with discordancy rates higher than the genome average are highlighted in bold italics; chromosomes with discordance rates lower than the genome average are highlighted in boldface.