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. 2013 Nov;23(11):1916–1927. doi: 10.1101/gr.151035.112

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© 2013 Omasits et al.; Published by Cold Spring Harbor Laboratory Press

This article is distributed exclusively by Cold Spring Harbor Laboratory Press for the first six months after the full-issue publication date (see http://genome.cshlp.org/site/misc/terms.xhtml). After six months, it is available under a Creative Commons License (Attribution-NonCommercial 3.0 Unported), as described at http://creativecommons.org/licenses/by-nc/3.0/.

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Figure 7. — Differential protein expression analysis. The log₂ fold change of the expression of all experimentally identified B. henselae proteins in the induced versus uninduced condition is shown against the mean normalized spectral count (MA plot). The 10% most significant differentially expressed proteins are highlighted, including 68 up-regulated proteins (red dots) and 57 down-regulated proteins (green dots). Selected regulated proteins are highlighted in different colors: members of the VirB/D4 T4SS (blue dots), Beps (dark blue dots), and several proteins containing autotransporter beta-domains (yellow dots). Proteins in these categories that rank below the 10% cutoff are shown as open circles.