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. 2013 Nov 1;3(11):2059–2067. doi: 10.1534/g3.113.007484

Table 2. Distribution of common core-region haplotypes in HapMap populations.

Haplotype HapMap Population
CEU TSI GIH CHB CHD JPT MKK LWK YRI ASW MEX
C1 7 4 13 1
C2 }1a 1 1 38 26 38 21 1
C3 14 14 5 3 9
C4 6 14 7 3
C5 1 1 13 14 50 19
C6 1 34 21 35 52 33 42 20 }7b
C7 2 40 39 36 1 2 3 1
C8 1 1 5 3
C9 3 36 44 51 65 63 61 27 15
C10 1 34 41 37 1 9
C11 109 173 167 3 3 1 92 9 3 22 60
Other-d 6 2 1 2 1 1 2 3 2
Other-a 3 6 5 7 10 8 9 1
total 115 176 176 168 170 172 286 180 230 126 104

Zeroes representing absent haplotypes are omitted. Other-d indicates minor haplotypes carrying derived allele of SNP c11 (rs1426654), whereas other-a indicates minor haplotypes carrying its ancestral allele. Populations are described in the Materials and Methods.

a

Haplotypes C2 and C3 are not distinguished in TSI.

b

C6 and C7 are not distinguished in MEX.