Table 2. Benchmark results.
Length in nucleotides | Number of SS elements | SAXS fit | expected by chance | ROSETTA for best SAXS fit | ROSETTA average and stdev | Iterations taken to find solution | |||||||||
1Q9A | 26 | 5 | 1.03 | 0.73 | 1.77 | 3.60 | 84% | 0.88 | 0.70 | 0.49 | 0.80 | 0.81 | 1261 | 0.47 | |
1L2X | 27 | 3 | 1.15 | 0.14 | 10.81 | 3.90 | 27% | 0.50 | 0.44 | 0.41 | 0.41 | 0.00 | 1657 | 0.03 | |
2LJJ | 27 | 4 | 1.15 | 0.33 | 6.62 | 3.90 | 55% | 0.59 | 0.34 | 0.38 | 0.45 | 0.03 | 2448 | 0.08 | |
1DDY | 35 | 3 | 1.14 | 0.08 | 14.48 | 6.11 | 22% | 0.37 | 0.33 | 0.34 | 0.29 | 0.00 | 1711 | 0.01 | |
2L3E | 35 | 4 | 0.94 | 0.39 | 5.56 | 6.11 | 61% | 0.63 | 0.35 | 0.34 | 0.54 | 0.42 | 1064 | 0.11 | |
2AU4 | 41 | 6 | 1.05 | 0.12 | 11.49 | 7.58 | 34% | 0.37 | 0.29 | 0.21 | 0.30 | 0.01 | 2922 | 0.03 | |
1XJR | 46 | 9 | 1.11 | 0.11 | 7.87 | 8.71 | 27% | 0.40 | 0.37 | 0.28 | 0.28 | 0.49 | 1100 | 0.03 | |
3E5C | 53 | 8 | 1.14 | 0.33 | 6.70 | 10.17 | 60% | 0.55 | 0.30 | 0.29 | 0.42 | 1.57 | 2923 | 0.09 | |
2KZL | 55 | 6 | 1.35 | 0.20 | 9.14 | 10.57 | 49% | 0.41 | 0.23 | 0.28 | 0.29 | 0.67 | 2899 | 0.05 | |
1U8D | 67 | 6 | 1.17 | 0.09 | 3.88 | 12.79 | 30% | 0.32 | 0.19 | 0.18 | 0.25 | 6.43 | 1512 | 0.08 |