Table 2. Summary of the candidate genes for the ontogenic resistance in Apple found at 72 and 96(hpi).
Fold-change at 72 hpi b | Fold-change at 96 hpi | |||||||
Sequence Name | Sequence Description | Length | E-Value | Similarity a | L1N vs. L7N | L1I vs. L7I | L1N vs. L7N | L1I vs. L7I |
MDP0000149327 | peroxidase 3 | 978 | 9.4E-167 | 0.78 | 28.5 | 23.36 | 15.87 | NDE |
MDP0000253215 | enhanced disease susceptibility 1 | 1947 | 0 | 0.64 | NDE c | NDE | −6.82 | −2.72 |
MDP0000312397 | lipoxygenase | 3363 | 0 | 0.86 | 9.07 | 23.67 | 23.81 | NDE |
MDP0000466190 | metallothionein-like protein | 201 | 8.4E-33 | 0.79 | 21.53 | 16.20 | 19.22 | 13.55 |
MDP0000940078 | lipid transfer protein | 342 | 5.5E-34 | 0.66 | 466.32 | 206.56 | 743.78 | NDE |
Mean protein similarity;
Fold-change of the genes differentially expressed between Leaf 1 (L1) and Leaf 7 (L7) for inoculated (I) and uninoculated (N) leaves at 72 and 96 hours post inoculation. Gene expressions of L1 have been normalised to L1average = 1 before calculating the fold-change for L7;
NDE: Not Differentially Expressed genes with the FDR P-value correction of 0.0001 procedure.