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Experiment 3: Execution times for binary samples experiment using 4 GPUs.
| GRN size | CPU | 32 targets/bl | 64 targets/bl | 128 targets/bl |
|---|---|---|---|---|
| 1024 | 4 min | 19.5 s | 20 s | 9.3 s |
| 2048 | 34.5 min | 1.3 min | 1.3 min | 35 s |
| 4096 | 5 h | 5.4 min | 5.4 min | 2.3 min |
| 8192 | 1.7 days | 43 min | 22.3 min | 9.4 min |
Columns from left to right: different sizes of GRNs (number of genes); execution times of the 6 core CPU algorithm; execution times for 3 experiments using the GPU algorihm: 32, 64 and 128 target genes per block using 4 GPUs.
