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Experiment 5: Execution times for ternary samples experiment using 2 GPUs.
| GRN size | CPU | 32 targets/bl | 64 targets/bl | 128 targets/bl |
|---|---|---|---|---|
| 1024 | 4.2 min | 24.5 s | 28 s | 13.1 s |
| 2048 | 36.9 min | 3.3 s | 1.9 min | 50 s |
| 4096 | 5.6 h | 20.2 min | 16 min | 3.7 min |
| 8192 | 1.9 days | 2.7 h | 1.6 h | 29 min |
Columns from left to right: different sizes of GRNs (number of genes); execution times of the 6 core CPU algorithm; execution times for 3 experiments using the GPU algorihm: 32, 64 and 128 target genes per block using 2 GPUs.
