Skip to main content
. 2013 Nov 5;8(11):e80218. doi: 10.1371/journal.pone.0080218

Table 1. No. of transcripts involved in different functional groups commonly changed under ABA, cold, drought, high-salinity and pH stress.

Putative Function No.    Description
Up-regulated transcripts
Rector-like protein kinase 2 alpha-glucan water dikinase 1, alpha-glucan water dikinase 1
Protein phosphatase 2 Protein phosphatase 2C 77, protein phosphatase 2C 12
Phosphorylase 3 ATPHS2, α-glucan phosphorylase isozyme H, starch phosphorylase
Chaperone protein 2 Chaperone DnaJ-domain containing protein, Tetratricopeptide repeat domain-containing protein
Ubiquitin-fold modifier 1 Ubiquitin-fold modifier 1
Lignin biosynthesis protein 1 Cinnamoyl-CoA reductase like protein
Transcription factor 2 NAC domain containing protein 47, SCPL20
Stress/defense response 4 Bifunctional Nucleases in basal defense response 1, Bifunctional Nucleases in basal defense response 1, SAP domain-containing protein, putative PAP_fibrillin
Detoxification 5 Putative thiamine biosynthesis protein, putative thiamine biosynthesis protein, putative thiamine biosynthesis protein, thiazole biosynthetic enzyme, Gossypium hirsutum alcohol dehydrogenase 1
Photosynthesis 1 Chlororespiratory reduction 3
Metabolism 3 Protein like SEX4 1, phenylalanine ammonia-lyase 1, MAR-binding filament-like protein 1
Electron transport system 1 NDH-dependent cyclic electron flow 1
Transporter 2 Copper transporter 1, nitrate transporter 1.5
Unknown protein 35 Unknown protein
Down-regulated transcripts
Rector-like protein kinase 1 Protein kinase family protein
Protein phosphatase 1 Serine theronine protein phosphatase PP1
F-box protein 2 EID1-like F-box protein 2, EIN3-binding F-box protein 1
Chaperone protein 1 TCP-1/cpn60 chaperonin family protein
Phosphorylase 1 C2 calcium/lipid-binding and phosphoribosyltransferase C-terminal domain-containing protein
Ribosomal protein 1 60S ribosomal protein L4-1
Post-translational modification 1 Carboxypeptidase
Transcription factor 1 Scarecrow transcription factor
Heat shock protein 2 Heat shock protein cognate 70, HSP20 family protein
Hormone 3 DELLA protein RGA, putative 12-oxophytodienoate reductase, 4-coumarate--CoA ligase-like 7
Stress/defense response 1 Immediate-early salicylate-induced glucosyltransferase
Phototropic response 1 Root phototropism protein 2
Sulfotransferase 1 Flavonol sulfotransferase-like protein
Cell wall biosunthesis 2 Cellulose synthase, pectinesterase 3
Metabolism 6 HXXXD-type acyl-transferase-like protein, putative 3-isopropylmalate dehydratase large subunit, beta-xylosidase 1, glucan endo-1,3-beta-D-glucosidase, OSJNBa0088H09.3, Nitrate reductase (NADH)
Transporter 2 Nitrate transporter 1.4, nitrate transporter 1.4
Other 3 Leucine-rich repeat-containing protein, putative elongation factor 2, putative elongation factor 2
Unknown protein 32 Unknown protein