Table 3.
Geno2pheno [coreceptor] False Positive Rates (FPR) obtained from duplicate sequence analysis (designed A and B) of a randomly selected panel of 20 paired samples stored at +4°C (WB4) and at−20°C (WB20)
| Patient | WB4 FPR-A | WB4 FPR-B | WB4 tropism | WB20 FPR-A | WB20 FPR-B | WB20 tropism |
|---|---|---|---|---|---|---|
| 196 |
7.8 |
11.7 |
non-R5 |
7.9 |
6.0 |
non-R5 |
| 488 |
42.6 |
49.0 |
R5 |
49.0 |
49.0 |
R5 |
| 541 |
86.2 |
86.2 |
R5 |
87.4 |
86.2 |
R5 |
| 904 |
5.8 |
5.8 |
non-R5 |
5.8 |
5.8 |
non-R5 |
| 1339 |
10.8 |
10.8 |
R5 |
16.6 |
10.8 |
R5 |
| 1512 |
8.5 |
7.8 |
non-R5 |
8.5 |
8.5 |
non-R5 |
| 5012 |
7.8 |
4.8 |
non-R5 |
5.8 |
3.9 |
non-R5 |
| 5100 |
10.6 |
8.6 |
non-R5 |
12.0 |
12.0 |
R5 |
| 5656 |
83.0 |
83.0 |
R5 |
83.0 |
80.4 |
R5 |
| 6773 |
83.0 |
93.5 |
R5 |
48.4 |
48.4 |
R5 |
| 7055 |
1.7 |
1.7 |
non-R5 |
1.7 |
1.7 |
non-R5 |
| 8113 |
91.2 |
92.8 |
R5 |
92.8 |
92.8 |
R5 |
| 8800 |
17.1 |
17.1 |
R5 |
17.1 |
0.2 |
non-R5 |
| 9056 |
1.5 |
0.2 |
non-R5 |
0.1 |
1.6 |
non-R5 |
| 9746 |
17.8 |
46.7 |
R5 |
22.0 |
73.1 |
R5 |
| 9850 |
19.1 |
47.8 |
R5 |
47.8 |
47.8 |
R5 |
| 9880 |
94.1 |
95.2 |
R5 |
96.0 |
96.0 |
R5 |
| 10161 |
90.9 |
90.9 |
R5 |
90.9 |
90.9 |
R5 |
| 11659 |
0.1 |
0.5 |
non-R5 |
0.1 |
0.2 |
non-R5 |
| 11686 | 23.3 | 46.8 | R5 | 35.3 | 23.3 | R5 |