Table 1.
MVN-GC, SAGE-tags and NGS-reads models parameters
| Parameters | Value |
|---|---|
| Feature size D |
20000 |
| Training sample |
60,120,180 |
| size n |
|
| Test sample size n
t
|
3000 |
| Class 0 (m0,σ0) |
(0.0, 0.6) |
| Class 1 (m1,σ1) |
(1.0, 0.6) |
| Correlation ρ |
0.4, 0.8 |
| Block size l |
5 |
| Global markers Dgm |
10 |
| Subclasses c |
2 |
| Heterogenous |
50 |
| markers per |
|
| subclass Dhm |
|
| High-variance |
2000 |
| non-markers Dhv |
|
| Low-variance |
17890 |
| non-markers Dlv |
|
| COV |
0.05, 0.1 |
| SAGE-tags range |
50K-100K |
| NGS-reads range |
1K-50K, 250K-300K, 500K-550K |
| |
5M-5M+50K, 10M-10M+50K, 15M-15M+50K |
| |
25M-25M+50K, 32.5M-32.5M+50K, 40M-40M+50K |
| 50M-50M+50K, 75M-75M+50K, 100M-100M+50K |