Skip to main content
. 2013 Oct 11;14:307. doi: 10.1186/1471-2105-14-307

Table 6.

Percentage of the NGS-reads experiments recovering certain number of global markers after feature selection for COV=0.1 and ρ =0 . 8

NGS-reads
 Sample
 <8
 8
 9
 10
range size markers markers markers markers
 
 n=60
 99.40
 0.52
 0.08
 0.00
1K-50K
 n=120
 68.14
 19.18
 10.92
 1.76
 
 n=180
 29.54
 28.16
 30.44
 11.86
 
 n=60
 73.14
 16.55
 8.57
 1.74
50K-100K (SAGE-tags)
 n=120
 14.16
 21.13
 36.43
 28.28
 
 n=180
 2.52
 8.03
 30.16
 59.29
 
 n=60
 44.26
 21.56
 23.10
 11.08
250K-300K
 n=120
 5.54
 10.34
 29.88
 54.24
 
 n=180
 0.84
 3.06
 15.92
 80.18
 
 n=60
 36.74
 22.00
 26.16
 15.10
500K-550K
 n=120
 4.74
 9.10
 28.14
 58.02
 
 n=180
 0.56
 2.66
 13.68
 83.10
 
 n=60
 32.76
 20.90
 26.96
 19.38
5M-5M+50K
 n=120
 4.38
 7.30
 24.74
 63.58
 
 n=180
 0.62
 2.08
 11.92
 85.38
 
 n=60
 32.56
 20.06
 26.84
 20.54
10M-10M+50K
 n=120
 4.38
 8.72
 23.72
 63.18
 
 n=180
 0.70
 2.18
 11.62
 85.50
 
 n=60
 31.90
 21.54
 27.70
 18.86
15M-15M+50K
 n=120
 4.46
 8.16
 23.28
 64.10
 
 n=180
 0.76
 2.12
 12.02
 85.10
 
 n=60
 32.56
 21.02
 26.90
 19.52
25M-25M+50K
 n=120
 3.96
 8.44
 24.30
 63.30
 
 n=180
 0.54
 2.32
 11.86
 85.28
 
 n=60
 33.00
 21.30
 26.74
 18.96
32.5M-32.5M+50K
 n=120
 4.18
 7.20
 24.10
 64.52
 
 n=180
 0.64
 1.98
 10.94
 86.44
 
 n=60
 32.94
 21.00
 27.26
 18.80
40M-40M+50K
 n=120
 4.36
 7.48
 24.22
 63.94
 
 n=180
 0.80
 2.24
 11.16
 85.80
 
 n=60
 32.70
 20.64
 26.70
 19.96
50M-50M+50K
 n=120
 4.14
 8.52
 23.42
 63.92
 
 n=180
 0.74
 2.32
 11.84
 85.10
 
 n=60
 33.38
 20.34
 27.02
 19.26
75M-75M+50K
 n=120
 4.48
 7.90
 24.26
 63.36
 
 n=180
 0.60
 1.92
 11.00
 86.48
 
 n=60
 32.70
 21.34
 26.86
 19.10
100M-100M+50K
 n=120
 4.54
 7.88
 23.64
 63.94
  n=180 0.80 2.58 11.64 84.98