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. 2013 Sep 25;14:94. doi: 10.1186/1471-2156-14-94

Table 12.

Enriched1 functional annotation clusters and most enriched Gene Ontology and KEGG categories by SNP association

SNP association Cluster score Category Name Number of genes P-value
General
11.39
Molecular Function FAT
nucleotide binding
54
1.4E-19
 
3.6
Biological Process FAT
protein amino acid phosphorylation
16
3.4E-05
 
 
KEGG Pathway
MAPK signaling pathway
11
2.1E-04
 
 
Molecular Function FAT
protein serine/threonine kinase activity
12
4.1E-04
 
3.02
Molecular Function FAT
substrate specific channel activity
18
4.0E-09
 
 
Biological Process FAT
ion transport
17
6.5E-06
Breed-dependent
16.11
Molecular Function FAT
nucleotide binding
76
3.5E-26
 
 
Biological Process FAT
protein amino acid phosphorylation
27
7.8E-11
 
9.83
Biological Process FAT
phosphorus metabolic process
35
7.2E-13
 
 
Molecular Function FAT
protein kinase activity
25
2.3E-09
 
5.42
Biological Process FAT
ion transport
32
2.3E-13
 
 
Molecular Function FAT
ion channel activity
21
5.4E-10
 
4.35
Biological Process FAT
membrane invagination
9
7.4E-06
Diet-dependent
16.71
Molecular Function FAT
nucleotide binding
65
2.1E-26
 
 
Biological Process FAT
phosphorus metabolic process
33
5.0E-15
 
3.23
Molecular Function FAT
metallopeptidase activity
12
1.5E-07
    Biological Process FAT proteolysis 14 7.0E-03

1Cluster enrichment score > 3. The most significant Gene Ontology molecular function, biological process and KEGG pathway categories within each cluster are listed.