Table 2.
Selected top features using SVM-RFE and RF-IS
| Method | *Feature | Description |
|---|---|---|
| SVM-RFE |
ROSM880105 |
Hydrophilicity of Polar Amino Acid Side-chains |
| RICJ880117 |
Relative preference in alpha helices |
|
| VENT840101 |
Hydrophobicity, the bitter taste of L-amino acids |
|
| ROBB760110 |
Conformational properties of middle turn |
|
| PONP800105 |
Surrounding hydrophobicity in beta-sheet |
|
| ZIMJ680101 |
Hydrophobicity by statistical methods |
|
| PRAM820103 |
Shape and surface features of globular proteins |
|
| RF-IS |
GUYH850101 |
Partition energy |
| VHEG790101 |
Transfer free energy |
|
| ROSM880105 |
Hydrophilicity of Polar Amino Acid Side-chains |
|
| CASG920101 |
Hydrophobicity scale from native protein structures |
|
| PONP800107 |
Accessibility reduction ratio |
|
| WILM950102 |
Hydrophobicity coefficient in RP-HPLC |
|
| X15925383 |
Pagg |
|
| LEVM780102 |
Normalized frequency of beta-sheet |
|
| PALJ810111 |
Normalized frequency of beta-sheet |
|
| PRAM900103 | Relative frequency in beta-sheet |
*AAIndex database entry numbers.