Table 1.
Association results for change in lutein and MPOD after supplementation with Lutein and Zeaxanthin.
Gene | SNP | Chr. | Position | MAF | Effect allele | Lutein |
MPOD |
||||
---|---|---|---|---|---|---|---|---|---|---|---|
Beta | SE | p-value | Beta | SE | p-value | ||||||
RPE65 | rs4926339 | 1 | 68694879 | 0.42 | A | −0.04 | 0.016 | 0.01 | 0.029 | 0.014 | 0.04 |
ABCG5 | rs10179921 | 2 | 43921795 | 0.05 | A | 0.237 | 0.23 | 0.3 | −0.023 | 0.028 | 0.4 |
ELOVL2 | rs1150561 | 6 | 11071833 | 0.02 | A | −0.736 | 0.361 | 0.04 | −0.045 | 0.053 | 0.4 |
ABCA1 | rs1929841 | 9 | 106587443 | 0.16 | G | −0.177 | 0.127 | 0.16 | −0.041 | 0.016 | 0.01 |
FADS1 | rs174534 | 11 | 61306034 | 0.38 | G | −0.001 | 0.1 | 0.99 | 0.032 | 0.015 | 0.03 |
SCARB1 | rs838879 | 12 | 123827394 | 0.22 | G | 0.011 | 0.138 | 0.94 | 0.004 | 0.02 | 0.84 |
SCARB1 | rs11057841 | 12 | 123882696 | 0.09 | T | −0.21 | 0.245 | 0.39 | −0.078 | 0.033 | 0.02 |
SCARB1 | rs4379922 | 12 | 123917069 | 0.27 | G | 0.085 | 0.109 | 0.43 | 0.008 | 0.013 | 0.54 |
BCMO1 | rs11645428 | 16 | 79816397 | 0.33 | A | 0.133 | 0.115 | 0.25 | −0.01 | 0.014 | 0.48 |
BCMO1 | rs6564851 | 16 | 79822098 | 0.46 | G | 0.036 | 0.104 | 0.73 | 0.009 | 0.014 | 0.51 |
BCMO1 | rs6564863 | 16 | 79852394 | 0.43 | T | 0.04 | 0.102 | 0.7 | 0.001 | 0.0013 | 0.96 |
ALDH3A2 | rs8069576 | 17 | 19510912 | 0.47 | A | −0.041 | 0.1 | 0.68 | 0.006 | 0.015 | 0.688 |
SNP – single nucleotide polymorphism; Chr. – chromosome; Position – physical position of variants is given according to NCBI Human Genome build 36; MAF – minor allele frequency; beta – betas for change in lutein concentration are not back-transformed; SE – standard error; MPOD – macular pigment optical density; bold – SNPs reaching nominal significance.