Table 2.
Primers for real-time quantitative PCR.
Gene | Sequence | Amplicon (bp) | Tm (°C) |
---|---|---|---|
COX1 | F: 5′-GCCTTTGCTTCAAAACGAGA-3′ | 105 | 58 |
R: 5′-GGTTGGTTCCTCGAATGTGT-3′ | |||
COX2 | F: 5′-TCTCCCCTCTCTACGCATTC-3′ | 161 | 59 |
R: 5′-CAGGTTTTAGGTCGTTTGTTG-3′ | |||
COX3 | F: 5′-ACTTCACCATCCTCCAAGC-3′ | 151 | 59 |
R: 5′-TGTCGTAGTAGGCAAACAATAAGG-3′ | |||
COX4i1 | F: 5′-TCTACTTCGGTGTGCCTTCG-3′ | 253 | 59.5 |
R: 5′-ACTCATTGGTGCCCTTGTTC-3′ | |||
COX5a | F: 5′-GGAGTTGCGTAAAGGGATGA-3′ | 247 | 60 |
R: 5′-CACTTTGTCAAGGCCCAGTT-3′ | |||
COX5b | F: 5′-GGAGGTGGTGTCCCTACTGA-3′ | 241 | 59.5 |
R: 5′-CAGCCAGAACCAGATGACAG-3′ | |||
COX6a1 | F: 5′-TCAACGTGTTCCTCAAGTCGC-3′ | 115 | 60 |
R: 5′-AGGGTATGGTTACCGTCTCCC-3′ | |||
COX6b | F: 5′-ATGGCCGAAGACATCAAGAC-3′ | 250 | 60 |
R: 5′-CAGGAAATGTGCCTTCTGCT-3′ | |||
COX6c | F: 5′-AGCGTCTGCGGGTTCATA-3′ | 154 | 60 |
R: 5′-GCCTGCCTCATCTCTTCAAA-3′ | |||
COX7a2 | F: 5′-GAGGACCATCAGCACCACTT-3′ | 234 | 59.5 |
R: 5′-TGGAGACTGGGATGACGAC-3′ | |||
COX7b | F: 5′-CGAAGCATTCAGCAAGTGGT-3′ | 209 | 59.5 |
R: 5′-TGGCATGACTACTGATCTCTCC-3′ | |||
COX7c | F: 5′-TCTGCCTTCCGTCTCTGC-3′ | 145 | 60 |
R: 5′-AGAAAGGAGCAGCAAATCCA-3′ | |||
COX8a | F: 5′-TCCTGCTTCGTGTGTTGTCT-3′ | 70 | 59 |
R: 5′-TCCCGCTTCTTGTAGCTTTC-3′ | |||
TFAM | F: 5′-CAGGGCTGCAATTTTCCTAA-3′ | 141 | 58 |
R: 5′-CCGAAGTGTTTTTCCAGCAT-3′ | |||
TFB1M | F: 5′-AAGATGGCCCTTTCGTTTATGG-3′ | 102 | 59 |
R: 5′-GACTGTGCTGTTTGCTTCCTG-3′ | |||
TFB2M | F: 5′-CCAAAACCCATCCCGTCAAAT-3′ | 135 | 59 |
R: 5′-AAGGGCTCCAAATGTGGAATAAA-3′ | |||
SURF1 | F: 5′-GGTTCCTGCTTTTAATCCCTGC-3′ | 119 | 61 |
R: 5′-GATGGGCTCAGCCATGACT-3′ | |||
Sp4 | F: 5′-TTGCAGCAAGGCCAGCAGACC-3′ | 130 | 63 |
R: 5′-GCTTCTTCTTTCCTGGTTCACTGCT-3′ | |||
NT3 | F: 5′-TCACCACGGAGGAAACGCTAT-3′ | 104 | 61 |
R: 5′-TCAATGGCTGAGGACTTGTCG-3′ | |||
Actb | F: 5′-GGCTGTATTCCCTCCATCG-3′ | 154 | 59.5 |
R: 5′-CCAGTTGGTAACAATGCCATGT-3′ |