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. 2013 Nov 7;8(11):e79743. doi: 10.1371/journal.pone.0079743

Table 1. Primers used for amplifying the cDNA and genomic DNA of c-type and g-type lysozymes and expression analysis in Asian seabass.

Primer name Primer sequence (5′-3′) Annealing temperature (°C) Application
(c-type)-A GCAGCGAGCTTCTGACTGATGAT 60 cDNA 3′ RACE
(c-type)-B TTACACCCCACAACCTGACACATA 60 cDNA 5′ RACE
g(c-type)-F ACATTTGATCCAGCAGAGAATACA 57 Amplified genomic DNA
g(c-type)-R CACCCCACAACCTGACACA
r(c-type)-R GCAGCGAGCTTCTGACTGATGAT 55 Real-time PCR
r(c-type)-F ATTACACCCCACAACCTGACACATAG
e(c-type)-F CCGAATTCCATGAGGGGTCTGCT 57 Expression in E. coil
e(c-type)-R CGAGCTCAGTTACACCCCACAACC
snp(c-type)-F CATACTTATTAGCGTCCTTGC 55 SNP PCR
snp(c-type)-R CTATCTACAGCCACATCCACC
(g-type)-A AGAGTCCAGGGCTGGAAAT 60 cDNA 3′ RACE
(g-type)-B TGTACCACTGAGCTCTGGC 60 cDNA 5′ RACE
g(g-type)-F ATGGGTGGGTGCTTTTACCTTCTT 57 Amplified genomic DNA
g(g-type)-R AGCCGTTGCTTTTGTACCACTGAG
r(g-type)-F AGAGTCCAGGGCTGGAAAT 55 Real-time PCR
r(g-type)-R TGTACCACTGAGCTCTGGC
e(g-type)-F CGAATTCCATGGGTTATGGAGACATCA 58 Expression in E. coil
e(g-type)-R TCTCGAGCTAAAAGCCGTTGCTTTTG
snp(g-type)-F TTGCGATAATGACTGACTAATG 55 SNP PCR
snp(g-type)-R TCAACCTACAGAAATGGGAAT

Note: Restriction site is underline