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. 2012 Oct 23;2012:917540. doi: 10.6064/2012/917540

Table 4.

Possible locations of the 6-mer motif along S 11, together with the corresponding motifs and their position weight matrix scores expressed as odds ratios. The last column lists the odds ratios normalized to have a sum of 1.

Site 6-mer Odds Ratio PNorm
1 CATGCC 0.153 0.004
2 ATGCCC 0.850 0.021
3 TGCCCT 0.664 0.016
4 GCCCTC 0.944 0.023
5 CCCTCA 0.254 0.006
6 CCTCAA 0.843 0.021
7 CTCAAG 0.609 0.015
8 TCAAGT 0.717 0.018
9 CAAGTG 0.613 0.015
10 AAGTGT 0.426 0.011
11 AGTGTG 0.967 0.024
12 GTGTGC 0.546 0.014
13 TGTGCA 0.594 0.015
14 GTGCAG 4.034 0.100
15 TGCAGA 0.251 0.006
16 GCAGAT 1.084 0.027
17 CAGATT 0.343 0.009
18 AGATTG 1.812 0.045
19 GATTGG 1.128 0.028
20 ATTGGT 0.408 0.010
21 TTGGTC 1.194 0.030
22 TGGTCA 0.888 0.022
23 GGTCAC 1.005 0.025
24 GTCACA 0.596 0.015
25 TCACAG 5.888 0.146
26 CACAGC 0.064 0.002
27 ACAGCA 0.569 0.014
28 CAGCAT 0.569 0.014
29 AGCATT 0.381 0.009
30 GCATTT 2.024 0.050
31 CATTTC 0.474 0.012
32 ATTTCA 1.317 0.033
33 TTTCAA 4.293 0.107
34 TTCAAG 2.475 0.061
35 TCAAGG 1.279 0.032