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. Author manuscript; available in PMC: 2014 Nov 1.
Published in final edited form as: Dev Biol. 2013 Aug 23;383(1):10.1016/j.ydbio.2013.08.013. doi: 10.1016/j.ydbio.2013.08.013

Table 2.

PAT assay validation of selected candidate target mRNAs.

Oocyte

Gene name Transcript ID Rank Score(d) PAT assay
CG4880 CG4880-RA 6 4.76 +
CG11971 CG11971-RA 23 4.15 +
Klp10A CG1453-RE 38 4.02 +
CG8180 CG8180-RA 39 4.01 +
klp67A CG10923-RA 40 4.01 +
CDC6 CG5971-RA 83 3.82 +
sced CG3273-RA 103 3.76 +
mei-S332 CG5303-RA 170 3.59 +
dmos* CG8767-RA 260 3.45 +
geminin CG3183-RA 369 3.31 +
AurB CG6620-RA 540 3.16 +
sse CG10583-RA 709 3.05 +
cyclin B* CG3510-RA 1083 2.84 +
cyclin A CG5940-RA 1247 2.77 +
HSF CG5748-RD 1557 2.66 +
sce CG5595-RA 1896 2.56 +
psq CG2368-RI 2968 2.28
mr CG3060-RA 3225 2.21
bifocal CG1822-RB 3899 2.06 +
eIF4G CG10811-RB 4013 2.03 +
CG5316 CG5316-RB 4077 2.02
Embryo

Gene name Transcript ID Rank Score(d) PAT assay
pimples CG5052-RA 19 4.18 +
punt CG7904-RA 197 3.76 +
spinster CG8428-RB 300 3.67
CG8485 CG8485-RD 492 3.55 +
costa CG1708-RA 600 3.48
bj1 CG10480-RA 737 3.43 +
CG5262 CG5262-RA 787 3.40 +
CG2921 CG2921-RA 998 3.33 +
CG33298 CG33298-RB 1087 3.30
Pp1alpha-96A CG6593-RA 1376 3.21 +
ubcE2h CG2257-RA 1569 3.16 +
tango11 CG30404-RB 1674 3.13 +
Dsor1 CG15793-RA 2146 3.03 +
CG8180 CG8180-RA 2164 3.03 +
bicoid* CG1034-RE 2293 3.00 +
grapes CG17161-RA 2346 2.99 +
string CG1395-RA 2477 2.96 +
Toll* CG5490-RA 3313 2.78 +
CG10209 CG10209-RA 3738 2.69 +
cyclin A CG5940-RA 3767 2.68 +
mei-p26 CG12218-RA 5702 2.29 +
CG8370 CG8730-RA 6476 2.13 +
CG34398 CG34398-RC 6551 2.11
*

previously identified WISP target

+

Shift in electrophoretic mobility due to WISP

No shift in electrophoretic mobility due to WISP