Table 3. Theoretical (docking) binding energies for lactose in monomeric and dimeric 2BLG.
Receptor | Binding Site located | Binding energy (kcal mol-1) |
---|---|---|
Rigid Monomer | Site C | -6.4 |
Monomer with flexible calyx a | Calyx mouth | -5.4 |
Rigid Dimer | Sites B and C | -6.4 |
Dimer with flexible interface b | Site B | -6.7 |
Site C. Non-interfacial site, located between sheet A and the last helix before the C-terminus.
Site B. Interfacial site.
ashows results with 7 flexible calyx residues. Equivalent results were obtained with 5 flexible residues.
bshows results for "full interface" docking, i.e. 7 flexible interfacial residues per subunit.