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. 2013 Nov 11;8(11):e77141. doi: 10.1371/journal.pone.0077141

Figure 1. A flowchart of meta-analysis loop.

Figure 1

Distance matrices are calculated from N related PDB entries in form of Cartesian coordinates. The lower triangles of the distance matrices are assembled into columns of matrix A. The first a few significant left singular vectors in U resulting from SVD are reconstructed to form decomposed lower triangles. The corresponding singular values and right singular vectors are presented in a multidimensional conformational space. Any given location in this space leads to a recomposed lower triangle by a linear combination of the significant lower triangles. Finally, a hypothetical structure is determined by distance geometry using all constraints in the recomposed lower triangle.