Table 2.
Data summary of p16INK4a immunohistochemical and HPV type sequencing results
Lab identifier | p16INK4a IHC | PCR: GP5+/6+ | PCR: pU-1M/pU-2R | PCR: HPV-31 specific | Combined HPV genotypes |
---|---|---|---|---|---|
1 | Negative | 31 | 16 | 31 | 16, 31 |
2 | Positive | 31 | 16 | 31 | 16, 31 |
3 | Positive | 31 | Negative | 31 | 31 |
41 | Positive | Negative | 16 | Not done | 16 |
52 | Positive | 31 | 16 | a | 16, 31 |
6 | Negative | 31 | Negative | 31 | 31 |
7 | Negative | 31 | Negative | a | 31 |
8 | Negative | Negative | 16 | Not done | 16 |
9 | Positive | 16 | 16 | Not done | 16 |
10 | Negative | 16 | Negative | Not done | 16 |
113 | Negative | 18 | 16 | Not done | 16, 18 |
12 | Positive | Negative | 16 | Not done | 16 |
13 | Positive | Negative | 16 | Not done | 16 |
14 | Negative | 31 | 16 | a | 16, 31 |
154 | Positive | 31 | 16 | 31 | 16, 31 |
164 | Negative | Negative | 16 | Not done | 16 |
17 | Positive | 31 | Negative | a | 31 |
18 | Positive | 31 | 16 | a | 16, 31 |
19 | Positive | 18 | 16 | Not done | 16, 18 |
20 | Negative | Negative | Negative | Not done | Negative |
215 | Negative | 31 | 16 | 31 | 16, 31 |
22 | Positive | 31 | 31 | a | 31 |
23 | Negative | 31 | 16 | a | 16, 31 |
24 | Negative | Negative | Negative | Not done | Negative |
25 | Positive | 16 | 16 | Not done | 16 |
26 | Positive | 31 | Negative | 31 | 31 |
276 | Positive | 31 | Negative | 31 | 31 |
288 | Positive | 16 | 16 | Not done | 16 |
29 | Negative | 31 | 16 | 31 | 16, 31 |
30 | Positive | 18 | Negative | Not done | 18 |
318 | Negative | Negative | 33 | Not done | 33 |
32 | Negative | 31 | 16 | 31 | 16, 31 |
33 | Positive | 31 | 16 | a | 16, 31 |
34 | Negative | 31 | 16 | 31 | 16,31 |
35 | Negative | 31 | 31 | a | 31 |
36 | Negative | 31 | 16 | a | 16, 31 |
37 | Positive | 31 | Negative | a | 31 |
38 | Positive | 31 | 16 | a | 16, 31 |
395 | Negative | 31 | 16 | a | 16, 31 |
40 | Positive | 31 | 16 | 31 | 16, 31 |
416 | Positive | Negative | Negative | Not done | Negative |
42 | Positive | Negative | 16 | Not done | 16 |
43 | Positive | 18 | 16 | Not done | 16, 18 |
442 | Positive | 31 | 16 | a | 16, 31 |
457 | Negative | 31 | 16 | a | 16, 31 |
463 | Negative | 31 | Negative | 31 | 31 |
471 | Negative | 31 | Negative | b | 31 |
487 | Negative | 31 | 16 | b | 16, 31 |
497 | Negative | 31 | 16 | 31 | 16, 31 |
507 | Negative | 31 | 16 | b | 16, 31 |
51 | Positive | 16 | 16 | Not done | 16 |
Total positive | 26 (51.0 %) | 41 (80.4 %) | 37 (72.6 %) | – | 48 (94.1 %) |
aBand seen of appropriate size detected on gel electrophoresis but with sequencing reaction failure
bInsufficient genetic material remaining for re-PCR analysis
Superscripts indicate tumors from same patient