Table 2.
rs No. (Alternative name) | Position | Amino acid substitution | Genotypea | MAF | HWEb | ||||||
---|---|---|---|---|---|---|---|---|---|---|---|
C/C | C/R | R/R | Control | Cased | Totald | Control | Casec | Totald | |||
rs11771443 | 5’ UTR | CC | CT | TT | 0.461 | 0.490 | 0.472 | 1.000 | 0.253 | 0.530 | |
rs2070744 (T786C) | promoter | TT | CT | CC | 0.113 | 0.065 | 0.094 | 0.149 | 0.581 | 0.292 | |
rs1549758 | Exon6 | Asp258Asp (Synonym) | CC | CT | TT | 0.135 | 0.186 | 0.155 | 1.000 | 0.483 | 0.728 |
rs1799983 (G894T) | Exon 7 | Glu298Asp (Non-synonym) | GG | GT | TT | 0.081 | 0.121 | 0.096 | 0.236 | 1.000 | 0.608 |
rs1800780 | Intron 12 | CC | CT | TT | 0.400 | 0.351 | 0.381 | 0.123 | 0.424 | 0.089 |
MAF minor allele frequency, SNP single nucleotide polymorphism, SLE systemic lupus erythematosus, ONFH osteonecrosis of the femoral head
a C/C: major homozygote, C/R: heterozygote, R/R: minor homozygote
b HWE: P values of deviation from Hardy-Weinberg equilibrium
c Case: SLE + SLE_ONFH
d Total: control + case