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. 2013 Aug 23;14(6):791–800. doi: 10.1007/s10162-013-0411-2

TABLE 2.

Replication results with P < 0.10 and meta-analysis results of those SNPs

UMN Study UPitt study Meta-analysis
Chr SNP Position (hg19) Ref allele Allele freq OR Z P value Allele freq OR Z P value OR (95 % CI) Z P value
2 rs10497394 174,297,659 G 0.629 1.754 4.18 2.9 × 10−5 0.637 1.422 4.07 4.7 × 10−5 1.51 (1.3–1.7) 5.66 1.52 × 10−8
5 rs386057 685,748 G 0.447 1.733 4.33 1.5 × 10−5 0.585 1.193 2.01 0.045 1.35 (1.2–1.6) 3.98 6.94 × 10−5
15 rs10775247 90,126,121 C 0.570 0.573 −4.00 6.3 × 10−5 0.460 0.861 −1.78 0.075 0.77 (0.67–0.89) −3.62 3.00 × 10−4
15 rs1110060 90,190,048 A 0.551 0.510 −4.91 9.1 × 10−7a 0.409 0.856 −1.80 0.072 0.74 (0.64–0.85) −4.10 4.09 × 10−5

Information provided in this table relates to the reference allele; Z score listed for minor allele

aMost significant result from UMN Study GWAS