TABLE 3.
Significant results from the three eQTL browsers used for the in silico eQTL analysis for the four SNPs of interest
| Chromosome | SNP | Database | Gene | Population | P value | Cis/trans |
|---|---|---|---|---|---|---|
| 2 | rs10497394 | eQTL browser @ pritchard lab | LDLR | CEU | 6.00E-05 | Trans (Chr19) |
| 5 | rs386057 | – | – | – | – | – |
| 15 | rs10775247 | SNP and CNV annotation database | RETN | CEU | 4.00E-05 | Trans (Chr19) |
| 15 | rs1110060 | eQTL browser @ pritchard lab | IQGAP1 | CEU | 3.07E-05 | Cis (exonQTL) |