Table 4.
Matrix of amplified targets with the different SYBR®Green qPCR assays
| Genus | Species | Subspecies | Serovars | rpoD-20 | invA-5 | iroB-192 | iroB-12 | safC-10 | safC-13 | STM0296 |
|---|---|---|---|---|---|---|---|---|---|---|
| Salmonella | enterica | enterica (I) | Senftenberg, Namur and Krefeld | + | + | + | + | - | - | + |
| enterica (I) | Djakarta, Heidelberg, Hofit, Perth, Virchow | + | + | + | + | + | + | - | ||
| enterica (I) | Others | + | + | + | + | + | + | + | ||
| salamae (II) | na | + | + | + | + | - | - | - | ||
| arizonae (IIIa) | na | + | + | + | + | - | - | - | ||
| diarizonae (IIIb) | na | + | + | + | + | - | - | - | ||
| houtenae (IV) | na | + | + | + | + | - | - | - | ||
| indica (VI) | na | + | + | + | + | - | - | - | ||
| bongori (V) | na | na | + | + | - | - | - | - | - |
na not applicable