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. Author manuscript; available in PMC: 2014 Sep 1.
Published in final edited form as: Transl Res. 2013 Jul 13;162(3):10.1016/j.trsl.2013.06.008. doi: 10.1016/j.trsl.2013.06.008

Table 1.

Computationally predicted integirn α subunits-targeting miRNAs were identified using MicroRNA (www.microrna.org) and confirmed by Targetscan online software (www.targetscan.org). All sequences of target genes were defined by microRNA score < −0.1 and by TargetScan context+ score > 80.

Gene symbol ID Chromsome site miRNA Target sequence micrrna score TargetScan Convert+ score* Conserved condition
  ITGA1 Integrin alpha 1 chr5 (q11.2) hsa-miR-200b UCUUU-GCUGAGCAGCU −1.2825 99 P
hsa-miR-200c CAAUUUUCCAUUUCAGUAUU −1.2825 99 P
hsa-miR-429 UUUUCCAUUUCAGUAUU −1.2816 99 P
hsa-miR-135a UUGUCAUGAAAAGCCAU −0.9526 95 P
hsa-miR-203 CAUUUCA −1.0219 86 P
hsa-miR-329 GCUUUUUAGGUGUGU −0.9223 95 P
hsa-miR-362-3p ACUGCUU-UUUAGGUGUGU −0.919 96 P
hsa-miR-135b UUGUCAUGAAAAGCCAU −0.9526 96 P
hsa-miR-10a CAACUCCUUGG---UACAGGGU −0.6762 85 P
hsa-miR-10b AACUCCUUGGUACAGGGU −0.3367 86 P
ITGA2 integrin alpha2 chr5 (q11.2) hsa-miR-195 UUUAUGCUGCU −0.2991 86 C
hsa-miR-16 AUUUA--UGCUGCU −0.2799 88 C
hsa-miR-15a UCCAAGCAUG-ACAACUU −0.2039 83 C
hsa-miR-15b UCAAUUUAUGCUGCU −0.3017 81 C
hsa-miR-497 UCAAUUUAUGCUGCU −0.3068 82 C
hsa-miR-424 UGCUGCU −0.3042 81 C
hsa-miR-27a ACUGUGA −0.712 88 C
hsa-miR-27b ACUGUGA −0.712 88 C
has-miR-19a AAUAUUUCA---AUUUGCAC −0.844 86 C
has-miR-19b AAUAUUUCA---AUUUGCAC −0.844 86 C
ITGA3 Integrin alpha3 chr17(q21.33) has-miR-199a-5p ACACUGG −0.4432 81 C
has-miR-199b-5p ACACUGG −0.4432 81 C
has-miR-181a AGCGACA-C-UUGAAUGU −0.6484 87 C
has-miR-181b AGCGACACU--UGAAUGU −0.6197 87 C
has-miR-181c AGCGACA-CUUGAAUGU −0.6483 87 C
has-miR-181d AGCGACACU--UGAAUGU −0.6197 87 C
hsa-miR-101 CAUGGUACUGU −0.2294 84 C
hsa-miR-506 GUGCCUU −0.5015 83 C
hsa-miR-124 CUCCUUGUGCCUU −0.505 83 C
ITGA4 integrin alpha4 chr2(q31.3) has-miR-30a UUUAAAAGACACUGUUUAC −0.8 95 C
has-miR-30b UGUUUAC −0.8036 92 C
has-miR-30c UGUUUAC −0.8036 92 C
has-miR-30d UGUUUAC −0.8036 93 C
has-miR-30e UAAAAGACACUGUUUAC −0.8036 95 C
ITGA5 integrin alpha5 chr12(q13.13) has-miR-26a CCAGCCCAGAGACAUACUUGA −0.6745 84 C
has-miR-26b GACAUACUUGA −0.6745 84 C
hsa-miR-128 CCCAUGCACUGUG −0.4134 92 C
hsa-miR-152 CAUGCACUG −0.2845 91 C
has-miR-148a UGCACUG −0.2845 91 C
has-miR-148b AUGCACUG −0.2845 91 C
has-miR-367 CUGUUGC--AAGUGCAAU −1.0428 98 C
has-miR-92a CUGUUGCAAGUGCAAU −1.0535 97 C
has-miR-92b CUGUUGCAAGUGCAAU −2.107 97 C
has-miR-363 GUUGCAAGUGCAAU −1.0535 97 C
has-miR-25 CUGUUGCAAGUGCAAU −1.0561 97 C
has-miR-32 AACUCUGUUGCAAGUGCAAU −1.0482 97 C
ITGA6 integrin alpha6 chr2(q31.1) hsa-miR-19a GUUUUGCAC −0.4404 84 C
hsa-miR-19b GUUUUGCAC −0.4404 84 C
has-miR-367 CUAAAUGUGCAAU −0.9819 88 C
hsa-miR-32 AAC-UA--AAUGUGCAAU −0.9789 88 C
hsa-miR-92a AAAUGUGCAAU −0.9819 85 C
hsa-miR-25 GUCUUAAACUAAAUGUGCAAU −0.9758 84 C
hsa-miR-363 AAUGUGCAAU −0.9789 84 C
hsa-miR-92b GUGCAAU −0.9819 84 C
has-miR-30a UGUUUAC −1.2059 87 C
has-miR-30b AAUAUAUUUUGUUUAC −1.2028 87 C
has-miR-30c AAAAUAUAUUUUGUUUAC −1.2028 87 C
has-miR-30d UGUUUAC −1.2075 87 C
has-miR-30e UGUUUAC −1.2059 86 C
has-miR-143 GUUAAAAAUG--UCAUCUC −0.9666 94 C
ITGA7 integrin alpha7 chr12(q13.2) hsa-miR-124 UCCCCGGAAGUGCCUU −0.5703 95 C
hsa-miR-506 UCCCCGGAA--GUGCCUU −0.5389 96 C
ITGA8 integrin alpha8 chr10 (p13) hsa-miR-8 AGAAGACCAAAG −0.3072 97 P
hsa-miR-199a-5p AACACUGG −0.571 89 P
hsa-miR-199b-5p CAAAGACCUCAAACACUGG −0.5746 88 P
ITGA9 integrin alpha9 chr3 (p22.2) hsa-miR-125a-5p GCAUGGUCAA--CCCUCAGGG −0.6957 80 C
hsa-miR-125b CUCAGGG −0.6957 80 C
ITGA10 integrin alpha10 chr1(q21.1) hsa-miR-22 AGUCCUCC--CUGGCAGCU −0.4393 88 C
ITGA11 integrin alpha11 chr15(q23) hsa-miR-148a UCUGGAAUGCACUG −0.5994 96 C
hsa-miR-148b UCUGGAAUGCACUG −0.5994 96 C
hsa-miR-152 UCUGGAAUGCACUG −0.5994 96 C
ITGAD integrin alpha D chr16(p11.2) hsa-miR-382 AAUCAACUUACAUGGAAACAACU −0.9143 80 P
hsa-miR-18a GUGCUA-A-GCACCUU −0.1672 85 P
hsa-miR-190 UAAUGU-UUUUACAUAUC −0.6222 88 P
hsa-miR-190b UAAUGUUUUUACAUAUC −0.2668 89 P
hsa-miR-365 UAUUUGUGGGCAUU −0.8989 94 P
ITGAE integrin alpha E chr17(p13.2) hsa-miR-382 AAUCAACUUACAUGGAAACAACU −0.9143 80 P
hsa-miR-18a GUGCUA-A-GCACCUU −0.1672 85 P
hsa-miR-190 UAAUGU-UUUUACAUAUC −0.6222 88 P
hsa-miR-190b UAAUGUUUUUACAUAUC −0.2668 89 P
hsa-miR-365 UAUUUGUGGGCAUU −0.8989 94 P
ITGAL integrin alpha L chr16(p11.2) hsa-miR-23a AAUGUGA −0.9167 99 C
hsa-miR-23b UUAU-CCAAUAAAUGUGA −0.9167 99 C
ITGAM integrin alpha M chr16(p11.2) hsa-miR-224 UCAAU-GUGACUU −0.1207 90 P
hsa-miR-539 CACCA---AU-AUUUCUC −1.136 98 P
hsa-miR-186 AUUCUUU −0.8343 85 P
hsa-miR-342-3p AUUCCAUUGUGUGAG −0.7084 80 P
hsa-miR-340 UGGUAGCA-UACUUUAUA −0.77 90 P
hsa-miR-185 AGCAGC--UUCUCUCC −0.2405 87 P
ITGAV integrin alpha V chr2 (q32.1) hsa-miR-142-3p ACACUAC −0.9501 95 C
hsa-miR-135a AUAUCAUAAUGCUUAAAGCCAU −0.6978 88 C
hsa-miR-135b AUAUCAUAAUGCUUAAAGCCAU −0.6978 90 C
hsa-miR-25 CAAGUGCAAU −0.8261 94 C
hsa-miR-367 GUCAUUGUUCUCAAGUGCAAU −0.8046 96 C
hsa-miR-363 AUUGUUCUCAAGUGCAAU −0.8118 94 C
hsa-miR-92a CAAGUGCAAU −0.8261 94 C
hsa-miR-92b CAAGUGCAAU −0.8261 93 C
hsa-miR-32 CAUUGUUCUCAAGUGCAAU −0.8154 94 C
ITGAW integrin alpha W not available not available
ITGAX integrin alpha X chr16(p11.2) hsa-miR-491-5p GCGAGUUUUCCCCAC −0.4861 90 P
hsa-miR-150 CUGCUUCCUGUCUUUGGGAG −0.5063 97 P
hsa-miR-103b ACAGUUCUGAAU-AUGCUGC −0.6088 99 P
hsa-miR-425 AGUGAAUUAGUGUCAU −0.4593 84 P
hsa-miR-145 AACUGGA −0.1668 85 P
hsa-miR-335 UACCGCUCUUG −0.2027 84 P
ITGA2B integrin alpha-IIB chr17(q21.31) hsa-miR-24 GACUGAGCC −0.4374 88 P