Table 4.

Candidate genes for grapevine phenology and fertility annotated in the PN40024 genome sequence

Chr.	Functional category	Gene annotation	Gene unique ID	Position	References
15	Metabolism	Chalcone and stilbene synthase VvCHS2	VIT_15s0021g02170	13,099,190–13,100,695	Parage et al. (2012)
		Glutathione S-transferase Z2 (GSTZ2)	VIT_15s0048g00950	15,085,283–15,090,953	Edwards et al. (2000); Braidot et al. (2008)
	Regulation	Scarecrow transcription factor 6 (SCL6)	VIT_15s0048g00270	14,396,828–14,399,794	Llave et al. (2002); Unver et al. (2010)
		Homeodomain GLABROUS1 (HDG1)	VIT_15s0048g02000	16,133,315–16,138,857	Nakamura et al. (2006)
	Signalling	Beta expansin VvEXPB3	VIT_15s0021g02670	13,673,378–13,674,771	Cosgrove (2000); Dal Santo et al. (2013b)
		Beta expansin VvEXPB4	VIT_15s0021g02700	13,735,914–13,737,731
3	Cellular process	Mitotic checkpoint protein BUB3	VIT_03s0091g00710	7,149,908–7,160,638	Caillaud et al. (2009)
		Xyloglucan:xyloglucosyl transferase (XTH10)	VIT_03s0088g00650	8,842,942–8,844,322	Nunan et al. (2001); Bourquin et al. (2002);
	Metabolism	Sinapoylglucose:malate sinapoyltransferase (SMT)	VIT_03s0091g01200	7,855,565–7,861,870	Lehfeldt et al. (2000); Bienert et al. (2012)
		Serine carboxypeptidase S10	VIT_03s0091g01240	7,903,958–7,907,570
		Sinapoylglucose-choline O-sinapoyltransferase (SCT)	VIT_03s0091g01270	7,935,398–7,938,767
		Serine carboxypeptidase S10	VIT_03s0091g01290	7,951,175–7,955,690
		Serine carboxypeptidase SCPL17	VIT_03s0088g00160	8,195,668–8,197,771
		Serine carboxypeptidase S10	VIT_03s0088g00260	8,252,549–8,257,129
	Signalling	Phytosulfokine PSK2	VIT_03s0088g00290	8,315,170–8,315,924	Motose et al. (2009)
18	Cellular process	Endo-1,4-beta-glucanase	VIT_18s0001g14040	12,086,327–12,090,970	Nunan et al. (2001); Buchanan et al. (2012)
	Regulation	Zinc finger (CCCH-type) family protein	VIT_18s0001g15570	13,682,439–13,700,040	Schmitz et al. (2005); Wang et al. (2008)
	Signalling	Cytokinin dehydrogenase 5 precursor	VIT_18s0001g13200	11,256,653–11,261,569	Fortes et al. (2011)
		Calmodulin binding protein, IQD32	VIT_18s0001g13870	11,862,607–11,871,541	Kline et al. (2010)
		Clavata 1 receptor kinase (CLV1)	VIT_18s0001g14610	12,668,387–12,671,744	Clark et al. (1997); Durbak and Tax (2011)
		ABA-responsive element-binding protein 3 (AREB3)	VIT_18s0001g14890	12,936,974–12,937,903	Kline et al. (2010)