Table 3. Average minimum heavy-atom distance between “gatekeeper” residues in the channel of Hs-MIF, Gl-MIF, Pf-MIF, Pb-MIF, and Py-MIF.
Protein | PDB-ID | Residue 44 (X, Å) | Residue 100 (X, Å) |
---|---|---|---|
Gl-MIF | 3T5S | N, 5.5 | R, 3.9 |
Hs-MIF | 1MIF | Y, 5.3 | V, 6.7 |
Pf-MIF | 2WKF | R, 3.6 | D, 4.6 |
Pb-MIF | 2WKB | R, 5.8* | D, 4.9 |
Py-MIF | 3GAD | R, 3.8 | D, 4.3 |
One of the three arginine side chains in the trimer is “flipped” such that there is no three-fold symmetry between the three arginines. Consequently, the “hole” is larger at this site in Pb-MIF